ggKbase home page

SCNpilot_expt_300_bf_scaffold_16510_2

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(730..1422)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Afipia birgiae RepID=UPI0002F8A91D similarity UNIREF
DB: UNIREF100
  • Identity: 65.8
  • Coverage: 222.0
  • Bit_score: 282
  • Evalue 3.90e-73
Uncharacterized protein {ECO:0000313|EMBL:EKS34918.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717 similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 213.0
  • Bit_score: 282
  • Evalue 7.10e-73
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 228.0
  • Bit_score: 269
  • Evalue 7.30e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGCTCGCATTCGCCGATCCAGCGGAACTCGATCGCGGCCCCCGGACCAAACCGGGGACCGAGCGGATGTGCGTCGTCACCCGGCAGGTCAAGCCGGTCGATGATCTGATCCGGTTCGTGCTCTCGCCTGCGGGCGAGGTCGTGCCGGATCTCAAGCGCAAGCTGCCCGGACGCGGGCTCTGGGTGTCGCTGTCACAGGCAGCGGTGGCCGAGGCGGCGCAGCGTGGCCTGTTCGCCAAGGGCTTCAAATGCGGGGTGAAAACCTCGCCCGCTTTGGCCGCCGATACGGCCGACCTGCTGGCCCGCAGCGCCGGCGAGGCGCTGGCCATGGTCGGCAAGGCCGGCCAGGTGGTGACCGGTTTTGCCAAGGTGGAAGCAGCCATCACGAGCGGTCAGGCGGTGGCCCTGATGCACGCCAGCGACGGCGCCGCTGACGGAATCCGCAAGCTCGACGCCCTCTGGCATGCCCGGACCGGGGGGCAAAATGCCGATTCCGCGGATTTTCCGGTCATAAAGGCCCTCACCGGCGACGAATTGGATTTGGCGCTGGGCCGGTCAAATGTGATACATGCTGCCCTGCTTGCAGGTCCAGCGACCCGAACTTTTCTGACCCGTTGTCAAAAGCTTGCCCGTTATCGGCAATTCGCCGCGACGGTCGCGGGCGGCAAGCGGGCGGACACCCCGAACACCTGA
PROTEIN sequence
Length: 231
MLAFADPAELDRGPRTKPGTERMCVVTRQVKPVDDLIRFVLSPAGEVVPDLKRKLPGRGLWVSLSQAAVAEAAQRGLFAKGFKCGVKTSPALAADTADLLARSAGEALAMVGKAGQVVTGFAKVEAAITSGQAVALMHASDGAADGIRKLDALWHARTGGQNADSADFPVIKALTGDELDLALGRSNVIHAALLAGPATRTFLTRCQKLARYRQFAATVAGGKRADTPNT*