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SCNpilot_expt_300_bf_scaffold_21108_2

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(82..750)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035DDB08 similarity UNIREF
DB: UNIREF100
  • Identity: 77.2
  • Coverage: 219.0
  • Bit_score: 366
  • Evalue 2.00e-98
  • rbh
Membrane protein {ECO:0000313|EMBL:ETR77900.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 219.0
  • Bit_score: 369
  • Evalue 3.20e-99
membrane protein similarity KEGG
DB: KEGG
  • Identity: 75.3
  • Coverage: 219.0
  • Bit_score: 358
  • Evalue 1.20e-96

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Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGACTGTCGAACGCTTTCTGCAGACTGTCGACGGCATCAGCACCTGGGTCGGCAAGGCGGCAGCCTGGCTGATCGTCGTGCTGATGGTGGTGGTCTGCCTCGAAGTCTTCAAGCGGTACCTGCTTAACGCACCGACCGCCTGGATCTTCGACCTCAACAACATGCTCTACGGCTCGCTGTTCATGCTGTGCGGCGCCTATGCGCTGGCGCAGAATGCCCATGTGCGCGGCGACTTCCTCTACAGCTCGATGCGGCCGCGCACCCAGGCGACGCTCGACCTGATCCTCTACTTCGTTTTCTTCTTTCCGGGCATCGCGGCGCTGCTCTATGCCGGCTGGGACTATGCCGGCGACGCCTGGCGCATTCGCGAGCATTCCAATGTCACGGCCGACGGCCCGCCGGTCTATCACTTCAAGACCGTCATCCCGATCGCCGGCGCGCTGGTGCTGCTGCAGGGGCTGGCCGAGGTGGTGCGCTGTATCGTCTGCCTGAGGACCGGCGCCTGGCCGGCGCGGCTCAAGGACGTGAGCGAGATCGACGTCGTCGAGGAGCAGCTCGCCCATTCCGAACATGTCGACGACGAGGCGCGCCAGCTCGCCATCGCTCGGGCGGCGCAGATCGACGAAACGGCGCGGCAGCGCGGGCTCGGGGGAGACAACAAGATATGA
PROTEIN sequence
Length: 223
MTVERFLQTVDGISTWVGKAAAWLIVVLMVVVCLEVFKRYLLNAPTAWIFDLNNMLYGSLFMLCGAYALAQNAHVRGDFLYSSMRPRTQATLDLILYFVFFFPGIAALLYAGWDYAGDAWRIREHSNVTADGPPVYHFKTVIPIAGALVLLQGLAEVVRCIVCLRTGAWPARLKDVSEIDVVEEQLAHSEHVDDEARQLAIARAAQIDETARQRGLGGDNKI*