ggKbase home page

SCNpilot_expt_300_bf_scaffold_21108_3

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(919..1383)

Top 3 Functional Annotations

Value Algorithm Source
C4-dicarboxylate ABC transporter n=1 Tax=Rhizobium mongolense RepID=UPI0003B316CC similarity UNIREF
DB: UNIREF100
  • Identity: 79.9
  • Coverage: 149.0
  • Bit_score: 253
  • Evalue 1.70e-64
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:ETR77899.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-1 similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 153.0
  • Bit_score: 269
  • Evalue 4.10e-69
putative TRAP dicarboxylate transporter-DctP subunit similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 149.0
  • Bit_score: 253
  • Evalue 3.60e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 465
AACGCCTCGTCGGACCGCGTGCTGGGCTTCGCCGACGTGTCGAAGATCTGCATGCTGCAGAGCTACCACCAGAACGCCGAGCAGTTCGAGATCATGTTCAACAAGGACAAGTTCAACGCGCTGCCGGAGAAGATGCGGGCGATCATCGTCAATGGCGTGGAGGCGGCGTCGCAGGACATGCAGTGGAAAGCGATCGACCGCTATTCCAAGGACTATGTCGAGCTGCAGACCAAGGACAAGGTCCGCTTCTACAAGACTCCCGACGCCGTGCTGAAACGCCAGCTCGAAGTCTATGACGACGTGGTCGCCAAGAAGTCGGCGGAGAACGCGCTGTTCAAGGAAATCGCCCAGTCACAAGTCGCCTTCGCCAAGCGCGCCGTGCAATGGGAGCAGGACACGGTCGTCGGCCGCCGGATGGCCTTCGATCACTATTTCGGCCCGCAAGCCAAGCCGATCCGGCTTTAG
PROTEIN sequence
Length: 155
NASSDRVLGFADVSKICMLQSYHQNAEQFEIMFNKDKFNALPEKMRAIIVNGVEAASQDMQWKAIDRYSKDYVELQTKDKVRFYKTPDAVLKRQLEVYDDVVAKKSAENALFKEIAQSQVAFAKRAVQWEQDTVVGRRMAFDHYFGPQAKPIRL*