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SCNpilot_expt_300_bf_scaffold_3224_curated

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_3224_curated_1
unknown

Not on your lists

1..753
DNA (753bp) protein (251aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_3224_curated_2
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(758..1567)
DNA (810bp) protein (270aa)
3-hydroxybutyryl-CoA dehydratase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UES2_MYXSD
3-hydroxybutyryl-CoA dehydratase
3-hydroxybutyryl-CoA dehydratase {ECO:0000313|EMBL:AGC46117.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
SCNpilot_expt_300_bf_scaffold_3224_curated_3
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1769..2323
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) RepID=B8HCT8_ARTCA
Uncharacterized protein {ECO:0000313|EMBL:AIY00394.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_3224_curated_4
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2323..2652
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6WEW7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAB97800.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_3224_curated_5
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2649..2987
DNA (339bp) protein (113aa)
Toxin MazF5 n=49 Tax=Mycobacterium tuberculosis complex RepID=MAZF5_MYCTU
hypothetical protein
Toxin MazF5 {ECO:0000313|EMBL:KCN26726.1}; TaxID=1423447 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium tuberculosis BTB05-348.;"
SCNpilot_expt_300_bf_scaffold_3224_curated_6
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3049..3540)
DNA (492bp) protein (164aa)
acetyltransferase; K00661 maltose O-acetyltransferase [EC:2.3.1.79]
hypothetical protein n=1 Tax=Streptomyces sp. CNS615 RepID=UPI00037789C8
Acetyltransferase, CysE/LacA/LpxA/NodL family {ECO:0000313|EMBL:ACA14990.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_expt_300_bf_scaffold_3224_curated_7
marine actinobacterium MedAcidi-G3, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3586..4146
DNA (561bp) protein (187aa)
4-carboxymuconolactone decarboxylase; K01607 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002ECDA2E
Uncharacterized protein {ECO:0000313|EMBL:KIE52702.1}; TaxID=1550402 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G3.;"
SCNpilot_expt_300_bf_scaffold_3224_curated_8
unknown

Not on your lists

comp(4148..4678)
DNA (531bp) protein (177aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_3224_curated_9
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4720..5037)
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Candidatus Microthrix RepID=R4YZM4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM61807.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
SCNpilot_expt_300_bf_scaffold_3224_curated_10
unknown

Not on your lists

5304..5465
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_3224_curated_11
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5794..6522)
DNA (729bp) protein (243aa)
ABC transporter related protein n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AB83_THECD
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ACY99026.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
SCNpilot_expt_300_bf_scaffold_3224_curated_12
unknown

Not on your lists

comp(6500..6895)
DNA (396bp) protein (132aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_3224_curated_13
unknown

Not on your lists

7219..7407
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_3224_curated_14
unknown

Not on your lists

7501..7857
DNA (357bp) protein (119aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_3224_curated_15
unknown

Not on your lists

7864..8055
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_3224_curated_16
unknown

Not on your lists

8173..8397
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_3224_curated_17
unknown

Not on your lists

8494..8595
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_3224_curated_18
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8544..9950)
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Rhodococcus ruber BKS 20-38 RepID=M2XMY5_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:EME62391.1}; TaxID=1278076 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber BKS 20-38.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_3224_curated_19
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10079..10993)
DNA (915bp) protein (305aa)
Acyl-CoA dehydrogenase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UER9_MYXSD
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AGC46112.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
Displaying 19 items

View Taxonomy