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SCNpilot_expt_300_bf_scaffold_3833_curated

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_3833_curated_1
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

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2..1459
DNA (1458bp) protein (486aa)
oligopeptidase B (EC:3.4.21.83); K01354 oligopeptidase B [EC:3.4.21.83]
Oligopeptidase B {ECO:0000313|EMBL:ADG90012.1}; EC=3.4.21.83 {ECO:0000313|EMBL:ADG90012.1};; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
Oligopeptidase B n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y950_THEBD
SCNpilot_expt_300_bf_scaffold_3833_curated_2
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1514..1999)
DNA (486bp) protein (162aa)
Flavin reductase domain protein FMN-binding n=1 Tax=Frankia sp. EUN1f RepID=D3CSA6_9ACTO
Flavin reductase domain protein FMN-binding {ECO:0000313|EMBL:EFC86528.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
flavin reductase domain-containing protein
SCNpilot_expt_300_bf_scaffold_3833_curated_3
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

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comp(2042..2893)
DNA (852bp) protein (284aa)
Putative Ribonuclease Z {ECO:0000313|EMBL:CCM63379.1}; EC=3.1.26.11 {ECO:0000313|EMBL:CCM63379.1};; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
Putative Ribonuclease Z n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YXZ8_9ACTN
hypothetical protein
SCNpilot_expt_300_bf_scaffold_3833_curated_4
unknown

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comp(3462..3551)
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_3833_curated_5
unknown

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3717..3866
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_3833_curated_6
marine actinobacterium MedAcidi-G2B, Actinobacteria, Actinobacteria, Bacteria

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comp(3910..4803)
DNA (894bp) protein (298aa)
mutY; A/G-specific adenine glycosylase (EC:3.2.2.-)
A/G-specific adenine glycosylase n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5AK79_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KIE49958.1}; TaxID=1550401 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G2B.;"
SCNpilot_expt_300_bf_scaffold_3833_curated_7
unknown

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comp(4800..5159)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI00037638E9
SCNpilot_expt_300_bf_scaffold_3833_curated_8
unknown

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5251..5403
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_3833_curated_9
Rhodococcus rhodochrous, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5542..6444)
DNA (903bp) protein (301aa)
Integral membrane protein n=1 Tax=Rhodococcus sp. EsD8 RepID=N1LYQ1_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:ETT25396.1}; TaxID=1429046 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodochrous ATCC 21198.;"
amino acid efflux protein; K11939 inner membrane transporter RhtA
SCNpilot_expt_300_bf_scaffold_3833_curated_10
unknown

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comp(6672..6776)
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_3833_curated_11
unknown

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comp(6936..7319)
DNA (384bp) protein (128aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_3833_curated_12
unknown

Not on your lists

comp(7335..7811)
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_3833_curated_13
unknown

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comp(7872..8330)
DNA (459bp) protein (153aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_3833_curated_14
unknown

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comp(8343..8642)
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_3833_curated_15
Burkholderia grimmiae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8886..9125
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00037BE215
Diguanylate phosphodiesterase {ECO:0000313|EMBL:KDR36781.1}; TaxID=1071679 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia grimmiae.;"
signal transduction protein containing a membrane domain an EAL and a GGDEF domain
SCNpilot_expt_300_bf_scaffold_3833_curated_16
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9177..10715
DNA (1539bp) protein (513aa)
Putative Acyl-CoA dehydrogenase {ECO:0000313|EMBL:CCM63367.1}; EC=1.3.8.- {ECO:0000313|EMBL:CCM63367.1};; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
putative acyl-CoA dehydrogenase (EC:1.3.99.-)
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI00036C9C7C
SCNpilot_expt_300_bf_scaffold_3833_curated_17

Not on your lists

11737..12417
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Cladophialophora carrionii CBS 160.54 RepID=V9DMS6_9EURO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKK45067.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_expt_300_bf_scaffold_3833_curated_18
unknown

Not on your lists

12664..12801
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_3833_curated_19
unknown

Not on your lists

12823..13068
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_3833_curated_20
unknown

Not on your lists

13183..13425
DNA (243bp) protein (81aa)

This feature has no annotations

Displaying 20 items

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