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SCNpilot_expt_300_bf_scaffold_1195_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1195_curated_1
BJP_IG2157_Actinomycetales_63_19, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(2..121)
DNA (120bp) protein (40aa)
Isochorismatase hydrolase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RCV9_9ACTO
isochorismatase hydrolase
Tax=BJP_IG2157_Actinomycetales_63_19
SCNpilot_expt_300_bf_scaffold_1195_curated_2
BJP_IG2157_Actinomycetales_63_19, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(125..703)
DNA (579bp) protein (193aa)
Isochorismatase hydrolase n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1IFK7_9PSEU
isochorismatase hydrolase
Tax=BJP_IG2157_Actinomycetales_63_19
SCNpilot_expt_300_bf_scaffold_1195_curated_3
unknown

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1053..1433
DNA (381bp) protein (127aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1195_curated_4
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1414..2556)
DNA (1143bp) protein (381aa)
Basic membrane lipoprotein n=1 Tax=Frankia sp. CN3 RepID=G6HF30_9ACTO
basic membrane lipoprotein; K02058 simple sugar transport system substrate-binding protein
Basic membrane lipoprotein {ECO:0000313|EMBL:ADP78613.1}; Flags: Precursor;; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_expt_300_bf_scaffold_1195_curated_5
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2614..3513)
DNA (900bp) protein (300aa)
Inner-membrane translocator n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3JB84_FRASU
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ADP78614.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_expt_300_bf_scaffold_1195_curated_6
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3513..4628)
DNA (1116bp) protein (372aa)
Inner-membrane translocator n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3JB85_FRASU
inner-membrane translocator; K02057 simple sugar transport system permease protein
Inner-membrane translocator {ECO:0000313|EMBL:ADP78615.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_expt_300_bf_scaffold_1195_curated_7
BJP_IG2157_Actinomycetales_63_19, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(4625..6232)
DNA (1608bp) protein (536aa)
ABC transporter; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
Monosaccharide-transporting ATPase n=1 Tax=Frankia sp. CN3 RepID=G6HF33_9ACTO
Tax=BJP_IG2157_Actinomycetales_63_19
SCNpilot_expt_300_bf_scaffold_1195_curated_8
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6229..6930)
DNA (702bp) protein (234aa)
Transcriptional regulator, GntR family n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3JB87_FRASU
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADP78617.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_expt_300_bf_scaffold_1195_curated_9
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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7120..8160
DNA (1041bp) protein (347aa)
Pirin family protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZY97_9ACTN
Pirin, N-terminal:Pirin, C-terminal {ECO:0000313|EMBL:EWC61157.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
pirin family protein
SCNpilot_expt_300_bf_scaffold_1195_curated_10
unknown

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comp(8639..8785)
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1195_curated_11
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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9725..12481
DNA (2757bp) protein (919aa)
Transcriptional regulator, LuxR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XCT4_VARPD
transcriptional regulator, LuxR family
Tax=RBG_16_Chloroflexi_68_14_curated
SCNpilot_expt_300_bf_scaffold_1195_curated_12
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12478..15972
DNA (3495bp) protein (1165aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI00036F26C3
transcriptional regulator
Transcriptional regulator, putative ATPase, winged helix family {ECO:0000313|EMBL:ABW14800.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
SCNpilot_expt_300_bf_scaffold_1195_curated_13
unknown

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16113..16793
DNA (681bp) protein (227aa)

This feature has no annotations

Displaying 13 items

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