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SCNpilot_expt_300_bf_scaffold_1441_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1441_curated_1
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..1245)
DNA (1245bp) protein (415aa)
Putative membrane protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TLJ8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KGN32686.1}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1441_curated_2
Tetrasphaera jenkinsii, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1242..2105)
DNA (864bp) protein (288aa)
Probable glycosyltransferase n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TLJ2_9MICO
Putative glycosyltransferase {ECO:0000313|EMBL:CCI52601.1}; TaxID=1193518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera jenkinsii Ben 74.;"
glycosyltransferase, group 2 family protein
SCNpilot_expt_300_bf_scaffold_1441_curated_3
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

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comp(2102..2839)
DNA (738bp) protein (246aa)
Methyltransferase type 11 n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y6F9_THEBD
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ADG87531.1}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
SCNpilot_expt_300_bf_scaffold_1441_curated_4
unknown

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comp(2866..2964)
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1441_curated_5
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3622..5016)
DNA (1395bp) protein (465aa)
Acyltransferase 3 n=1 Tax=Frankia sp. CN3 RepID=G6HPH6_9ACTO
Putative acyltransferase {ECO:0000313|EMBL:KJE21353.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
acyltransferase 3
SCNpilot_expt_300_bf_scaffold_1441_curated_6
unknown

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comp(5059..5613)
DNA (555bp) protein (185aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1441_curated_7
unknown

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comp(5635..5802)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1441_curated_8
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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6486..8876
DNA (2391bp) protein (797aa)
Uncharacterized protein (Fragment) n=1 Tax=Streptomyces albulus CCRC 11814 RepID=S9Z6E1_STRA9
Uncharacterized protein {ECO:0000313|EMBL:AIA03403.1}; TaxID=68570 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus.;"
hypothetical protein rbh
SCNpilot_expt_300_bf_scaffold_1441_curated_9
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

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comp(8812..9744)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YWV4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM62515.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
putative aminoglycoside phosphotransferase
SCNpilot_expt_300_bf_scaffold_1441_curated_10

Not on your lists

9875..10297
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=uncultured bacterium A1Q1_fos_515 RepID=L7VYV6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KGA17021.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1441_curated_11

Not on your lists

10301..11134
DNA (834bp) protein (278aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000313|EMBL:AGC71314.1}; EC=3.2.2.23 {ECO:0000313|EMBL:AGC71314.1};; TaxID=1256581 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_515.;"
Formamidopyrimidine-DNA glycosylase n=1 Tax=uncultured bacterium A1Q1_fos_515 RepID=L7VV09_9BACT
putative DNA glycosylase
SCNpilot_expt_300_bf_scaffold_1441_curated_12
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

11451..12170
DNA (720bp) protein (240aa)
Uncharacterised protein {ECO:0000313|EMBL:CRH48281.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
SCNpilot_expt_300_bf_scaffold_1441_curated_13
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12298..12876)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI000364B8BB
Putative flavin-binding monooxygenase {ECO:0000313|EMBL:GAK44907.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
putative flavin-binding monooxygenase
Displaying 13 items

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