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SCNpilot_expt_300_bf_scaffold_1067_curated

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1067_curated_1
unknown

Not on your lists

comp(48..683)
DNA (636bp) protein (212aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1067_curated_2
unknown

Not on your lists

1006..1179
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1067_curated_3
unknown

Not on your lists

1814..2071
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1067_curated_4
unknown

Not on your lists

2370..2798
DNA (429bp) protein (143aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1067_curated_5
unknown

Not on your lists

comp(3382..3834)
DNA (453bp) protein (151aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1067_curated_6
unknown

Not on your lists

4306..4803
DNA (498bp) protein (166aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1067_curated_7
unknown

Not on your lists

comp(4638..5156)
DNA (519bp) protein (173aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1067_curated_8
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5190..6134
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI0003649878
Glutamate decarboxylase {ECO:0000313|EMBL:ETK35818.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
putative aromatic amino acid decarboxylase
SCNpilot_expt_300_bf_scaffold_1067_curated_9
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6168..6701)
DNA (534bp) protein (178aa)
TetR family transcriptional regulator n=1 Tax=Paenibacillus elgii RepID=UPI000248C6A8
TetR family transcriptional regulator {ECO:0000313|EMBL:KEQ24719.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
regulatory protein TetR
SCNpilot_expt_300_bf_scaffold_1067_curated_10
R_Saccharibacteria_47_12, Candidatus Saccharibacteria, Bacteria

Not on your lists

6938..8578
DNA (1641bp) protein (547aa)
Drug resistance transporter n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A558_9ACTN
drug resistance transporter
Tax=RIFCSPHIGHO2_02_FULL_Saccharibacteria_47_12_curated
SCNpilot_expt_300_bf_scaffold_1067_curated_11
Knoellia subterranea, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8743..9711)
DNA (969bp) protein (323aa)
Pirin domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0U7_PSEUX
Pirin {ECO:0000313|EMBL:KGN37015.1}; TaxID=1385521 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 19937.;"
pirin; K06911
SCNpilot_expt_300_bf_scaffold_1067_curated_12
marine actinobacterium MedAcidi-G3, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9792..10145)
DNA (354bp) protein (118aa)
Uncharacterized protein {ECO:0000313|EMBL:KIE53272.1}; TaxID=1550402 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G3.;"
SCNpilot_expt_300_bf_scaffold_1067_curated_13
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10162..10932)
DNA (771bp) protein (257aa)
Putative Site-specific DNA-methyltransferase (Adenine-specific) {ECO:0000313|EMBL:CCM65269.1}; EC=2.1.1.72 {ECO:0000313|EMBL:CCM65269.1};; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
putative modification methylase (EC:2.1.1.-)
Putative Site-specific DNA-methyltransferase (Adenine-specific) n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z2X3_9ACTN
SCNpilot_expt_300_bf_scaffold_1067_curated_14
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(10940..11530)
DNA (591bp) protein (197aa)
putative modification methylase (EC:2.1.1.-)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
Putative modification methylase n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A528_9ACTN
SCNpilot_expt_300_bf_scaffold_1067_curated_15
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

11638..12486
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9W8T5_9CYAN
Membrane protein {ECO:0000313|EMBL:KJH72844.1}; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA595.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1067_curated_16
Mycobacterium fortuitum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12494..12880)
DNA (387bp) protein (129aa)
glgB; 1,4-alpha-glucan-branching protein (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1214102 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium fortuitum subsp. fortuitum DSM 46621
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F2N6_MODMB
SCNpilot_expt_300_bf_scaffold_1067_curated_17
RBG_16_Chloroflexi_58_8_curated, Chloroflexi, Bacteria

Not on your lists

13089..14168
DNA (1080bp) protein (360aa)
Putative Linear gramicidin synthase subunit C n=1 Tax=Streptomyces aurantiacus JA 4570 RepID=S4A1R7_9ACTO
Tax=RBG_16_Chloroflexi_58_8_curated
SCNpilot_expt_300_bf_scaffold_1067_curated_18
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14329..15573
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6W5B0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAB94345.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1067_curated_19
unknown

Not on your lists

comp(15596..16285)
DNA (690bp) protein (230aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1067_curated_20
unknown

Not on your lists

16357..16941
DNA (585bp) protein (195aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1067_curated_21
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16945..18252)
DNA (1308bp) protein (436aa)
Proteinase inhibitor I4 serpin n=1 Tax=Frankia sp. CN3 RepID=G6HE14_9ACTO
Serine protease inhibitor (Serpin family) {ECO:0000313|EMBL:AJR18215.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
peptidase
SCNpilot_expt_300_bf_scaffold_1067_curated_22
Mycobacterium chelonae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18249..18887)
DNA (639bp) protein (213aa)
carboxymuconolactone decarboxylase n=1 Tax=Mycobacterium abscessus RepID=UPI0002DBF326
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:AKC39549.1}; TaxID=1774 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chelonae.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1067_curated_23
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19044..21026
DNA (1983bp) protein (661aa)
Beta-lactamase {ECO:0000256|RuleBase:RU361140}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140};; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
Penicillin-binding protein transpeptidase n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6W576_KINRD
penicillin-binding protein transpeptidase
SCNpilot_expt_300_bf_scaffold_1067_curated_24
unknown

Not on your lists

comp(21580..21792)
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1067_curated_25
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(22699..22953)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6XFE6_9MICO
hypothetical protein
Tax=RBG_16_Actinobacteria_67_15_curated
SCNpilot_expt_300_bf_scaffold_1067_curated_26
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

22992..23543
DNA (552bp) protein (184aa)
Putative RNA polymerase ECF subfamily sigma factor n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZWA4_9ACTN
putative RNA polymerase ECF subfamily sigma factor
Tax=RBG_16_Actinobacteria_68_21_curated
SCNpilot_expt_300_bf_scaffold_1067_curated_27
unknown

Not on your lists

23536..24615
DNA (1080bp) protein (360aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1067_curated_28
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

24686..25354
DNA (669bp) protein (223aa)
id=4397744 bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=GWC2_RIF_CHLX_73_18_curated
SCNpilot_expt_300_bf_scaffold_1067_curated_29
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25359..25856)
DNA (498bp) protein (166aa)
carboxymuconolactone decarboxylase n=1 Tax=Amycolatopsis balhimycina RepID=UPI00037586BA
Uncharacterized protein {ECO:0000313|EMBL:AIY17448.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1067_curated_30
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25853..26950)
DNA (1098bp) protein (366aa)
Dihydrodipicolinate reductase n=1 Tax=Rhodococcus wratislaviensis IFP 2016 RepID=L2TBS5_9NOCA
Dihydrodipicolinate reductase {ECO:0000313|EMBL:ELB87449.1}; TaxID=1195242 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis IFP 2016.;"
hypothetical protein
Displaying items 1-30 of 31 in total

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