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SCNpilot_expt_300_bf_scaffold_808_curated

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_808_curated_1
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1..1194
DNA (1194bp) protein (398aa)
molecular chaperone GroES n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262768F
Threonine dehydrogenase and related Zn-dependent dehydrogenase {ECO:0000313|EMBL:AIJ25015.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
threonine dehydrogenase and related Zn-dependent dehydrogenase
SCNpilot_expt_300_bf_scaffold_808_curated_2
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

1263..1415
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5AQQ7_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN03545.1}; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
SCNpilot_expt_300_bf_scaffold_808_curated_3
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1503..4229
DNA (2727bp) protein (909aa)
magnesium or manganese-dependent protein phosphatase (EC:2.7.13.3)
Magnesium or manganese-dependent protein phosphatase {ECO:0000313|EMBL:AEV84675.1}; EC=2.7.13.3 {ECO:0000313|EMBL:AEV84675.1};; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
Magnesium or manganese-dependent protein phosphatase n=1 Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8S0V7_ACTS5
SCNpilot_expt_300_bf_scaffold_808_curated_4
Streptomyces sp. NRRL F-4428, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4258..4581)
DNA (324bp) protein (108aa)
anti-sigma factor antagonist n=1 Tax=Cellulomonas sp. JC225 RepID=UPI00030CE103
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1609137 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL F-4428.;"
anti-sigma-factor antagonist
SCNpilot_expt_300_bf_scaffold_808_curated_5
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4630..5034)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Frankia sp. BMG5.12 RepID=UPI00037A37AB
anti-sigma regulatory factor, serine/threonine protein kinase
Histidine kinase {ECO:0000313|EMBL:KJY32288.1}; Flags: Fragment;; TaxID=1609133 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
SCNpilot_expt_300_bf_scaffold_808_curated_6
unknown

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comp(5119..5316)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_808_curated_7
unknown

Not on your lists

6154..6255
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_808_curated_8
unknown

Not on your lists

6277..6378
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_808_curated_9
unknown

Not on your lists

6538..6744
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_808_curated_10

Not on your lists

7028..8032
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00037AA00A
Uncharacterized protein {ECO:0000313|EMBL:KGA21409.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
dehydrogenase/reductase
SCNpilot_expt_300_bf_scaffold_808_curated_11
Streptomyces pratensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8198..8848
DNA (651bp) protein (217aa)
Putative secreted protein n=2 Tax=Streptomyces RepID=E8W0V3_STRFA
hypothetical protein
Putative secreted protein {ECO:0000313|EMBL:ADW07425.1}; TaxID=591167 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pratensis (strain ATCC 33331 / IAF-45CD).;"
SCNpilot_expt_300_bf_scaffold_808_curated_12
unknown

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8902..9237
DNA (336bp) protein (112aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_808_curated_13
unknown

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comp(9412..9699)
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_808_curated_14
R_PER_ii_55_13, PER-ii, Bacteria

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comp(9722..10255)
DNA (534bp) protein (178aa)
Tax=RIFCSPHIGHO2_01_FULL_PER_ii_55_13_curated
SCNpilot_expt_300_bf_scaffold_808_curated_15
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10359..13001
DNA (2643bp) protein (881aa)
LuxR family transcriptional regulator n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002627982
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEH10037.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
SCNpilot_expt_300_bf_scaffold_808_curated_16
unknown

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comp(13085..13492)
DNA (408bp) protein (136aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_808_curated_17
unknown

Not on your lists

comp(13654..13911)
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_808_curated_18
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14168..14302)
DNA (135bp) protein (45aa)
F420-dependent oxidoreductase, G6PDH family n=2 Tax=Micromonospora RepID=D9SZY0_MICAI
f420-dependent oxidoreductase, g6pdh family
F420-dependent oxidoreductase, G6PDH family {ECO:0000313|EMBL:ADL45262.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
SCNpilot_expt_300_bf_scaffold_808_curated_19
unknown

Not on your lists

14419..14664
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_808_curated_20
unknown

Not on your lists

14695..14889
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_808_curated_21
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15094..15387
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Corynebacterium doosanense RepID=UPI000361524A
Flavodoxin {ECO:0000313|EMBL:KGM11033.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
NADPH-dependent FMN reductase
SCNpilot_expt_300_bf_scaffold_808_curated_22
Streptomyces coelicoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15530..17113
DNA (1584bp) protein (528aa)
FAD-dependent oxidoreductase n=1 Tax=Streptomyces sp. CNB091 RepID=UPI00035E1615
Dehydrogenase {ECO:0000313|EMBL:EHN74595.1}; TaxID=1120227 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces coelicoflavus ZG0656.;"
FAD dependent oxidoreductase
SCNpilot_expt_300_bf_scaffold_808_curated_23
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17115..17549
DNA (435bp) protein (145aa)
Uncharacterized protein n=2 Tax=Mycobacterium smegmatis RepID=A0R3A4_MYCS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELQ87095.1}; TaxID=1214915 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis MKD8.;"
SCNpilot_expt_300_bf_scaffold_808_curated_24
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

17836..18702
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Frankia sp. CN3 RepID=G6H936_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJE77069.1}; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Ferrimicrobium acidiphilum DSM 19497.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_808_curated_25
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

18699..19358
DNA (660bp) protein (220aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QET9_CATAD
Uncharacterized protein {ECO:0000313|EMBL:KJE77070.1}; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Ferrimicrobium acidiphilum DSM 19497.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_808_curated_26
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

19505..19939
DNA (435bp) protein (145aa)
Putative blue copper protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A3R9_9ACTN
putative blue copper protein
Putative blue copper protein {ECO:0000313|EMBL:BAN03094.1}; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
SCNpilot_expt_300_bf_scaffold_808_curated_27
unknown

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20083..20208
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_808_curated_28
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20350..21615
DNA (1266bp) protein (422aa)
cation transporter n=1 Tax=Micromonospora sp. CNB394 RepID=UPI000364EA09
Sodium/hydrogen exchanger {ECO:0000313|EMBL:CCH17413.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
sodium/hydrogen exchanger
SCNpilot_expt_300_bf_scaffold_808_curated_29
unknown

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comp(22015..22221)
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_808_curated_30
unknown

Not on your lists

comp(22261..22518)
DNA (258bp) protein (86aa)

This feature has no annotations

Displaying items 1-30 of 47 in total

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