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SCNpilot_expt_300_bf_scaffold_964_curated

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_964_curated_1
unknown

Not on your lists

2..271
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_964_curated_2
unknown

Not on your lists

comp(417..1004)
DNA (588bp) protein (196aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_964_curated_3
Gordonia polyisoprenivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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1066..1692
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Gordonia polyisoprenivorans RepID=UPI0003695405
Putative uncharacterized protein {ECO:0000313|EMBL:GAB23385.1}; TaxID=1077976 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia polyisoprenivorans NBRC 16320 = JCM 10675.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_964_curated_4
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1712..2143
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2Q8V5_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:AIG74276.1}; TaxID=208439 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_964_curated_5
unknown

Not on your lists

2164..2682
DNA (519bp) protein (173aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_964_curated_6
unknown

Not on your lists

2812..3438
DNA (627bp) protein (209aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_964_curated_7
unknown

Not on your lists

3545..3799
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_964_curated_8
unknown

Not on your lists

3911..4282
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_964_curated_9
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4704..7703)
DNA (3000bp) protein (1000aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037C115A
SNF2-like protein
SNF2-related protein {ECO:0000313|EMBL:ADB33686.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
SCNpilot_expt_300_bf_scaffold_964_curated_10
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7874..8326
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q608_STANL
hypothetical protein; K09117 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD40307.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
SCNpilot_expt_300_bf_scaffold_964_curated_11
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8361..9050
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) RepID=F6ES06_AMYSD
Uncharacterized protein {ECO:0000313|EMBL:AJT61854.1}; TaxID=1403539 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_964_curated_12
Mycobacterium vaccae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9051..9536)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0ULF1_MYCVA
Uncharacterized protein {ECO:0000313|EMBL:EJZ07651.1}; TaxID=1194972 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vaccae ATCC 25954.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_964_curated_13

Not on your lists

comp(9576..10499)
DNA (924bp) protein (308aa)
glycosyl transferase; K13693 glucosyl-3-phosphoglycerate synthase [EC:2.4.1.-]
Group 2 family glycosyl transferase n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YX93_9ACTN
Group 2 family glycosyl transferase {ECO:0000313|EMBL:KGA16838.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
SCNpilot_expt_300_bf_scaffold_964_curated_14
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10747..11025
DNA (279bp) protein (93aa)
Sulfur carrier protein CysO n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z115_9ACTN
Sulfur carrier protein CysO {ECO:0000313|EMBL:CCM62981.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_964_curated_15
Knoellia subterranea, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11066..12388)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZVK3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGN39589.1}; TaxID=1385521 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 19937.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_964_curated_16
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(13084..13443)
DNA (360bp) protein (120aa)
Putative uncharacterized protein n=1 Tax=Mycobacterium tuberculosis RepID=Q50811_MYCTU
Tax=RBG_16_Armatimonadetes_67_12_curated
SCNpilot_expt_300_bf_scaffold_964_curated_17
unknown

Not on your lists

comp(13543..13671)
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_964_curated_18
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

13863..14453
DNA (591bp) protein (197aa)
60 kDa chaperonin n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M1B2_ACIFD
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
chaperonin GroEL; K04077 chaperonin GroEL
SCNpilot_expt_300_bf_scaffold_964_curated_19
unknown

Not on your lists

comp(15462..15731)
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_964_curated_20
Nocardia asteroides, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15874..16116
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI000373279B
Putative hydrolase {ECO:0000313|EMBL:GAD82104.1}; TaxID=1110697 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia asteroides NBRC 15531.;"
hydrolase
SCNpilot_expt_300_bf_scaffold_964_curated_21
unknown

Not on your lists

comp(16184..16534)
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_964_curated_22
unknown

Not on your lists

16767..16874
DNA (108bp) protein (36aa)

This feature has no annotations

Displaying 22 items

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