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SCNpilot_expt_300_bf_scaffold_3090_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_3090_curated_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..436)
DNA (435bp) protein (145aa)
LmbE family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSM3_PSEUX
LmbE family protein
LmbE family protein {ECO:0000313|EMBL:AEA23733.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_expt_300_bf_scaffold_3090_curated_2
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

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comp(504..1370)
DNA (867bp) protein (289aa)
mcr; alpha-methylacyl-CoA racemase (EC:5.1.99.4)
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z0E6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM62102.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
SCNpilot_expt_300_bf_scaffold_3090_curated_3
unknown

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1689..1940
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_3090_curated_4
unknown

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2059..2445
DNA (387bp) protein (129aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_3090_curated_5
Rhodococcus sp. PML026, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2538..3920)
DNA (1383bp) protein (461aa)
Putative acetyl-CoA carboxylase beta chain {ECO:0000313|EMBL:KJV03540.1}; EC=6.4.1.2 {ECO:0000313|EMBL:KJV03540.1};; TaxID=1356405 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. PML026.;"
acetyl-CoA carboxylase, carboxyl transferase subunit beta; K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2]; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2]
hypothetical protein n=1 Tax=Streptomyces prunicolor RepID=UPI000371D90A
SCNpilot_expt_300_bf_scaffold_3090_curated_6
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4091..4909
DNA (819bp) protein (273aa)
ABC transporter substrate-binding protein n=1 Tax=Serinicoccus profundi RepID=UPI000255E5CF
Contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92622.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
extracellular solute-binding protein; K02030 polar amino acid transport system substrate-binding protein
SCNpilot_expt_300_bf_scaffold_3090_curated_7
Arthrobacter sp. 11W110_air, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4945..5808
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Arthrobacter sp. TB 23 RepID=UPI0002E5E800
Putative glutamine ABC transporter permease protein GlnM {ECO:0000313|EMBL:CEA08996.1}; TaxID=1461584 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. 11W110_air.;"
ABC transporter permease; K02029 polar amino acid transport system permease protein
SCNpilot_expt_300_bf_scaffold_3090_curated_8
Pantoea ananatis, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6103..6474
DNA (372bp) protein (124aa)
GlnQ n=5 Tax=Pantoea ananas RepID=D4GLH6_PANAM
glnQ; glutamine transport ATP-binding protein GlnQ
Glutamine transport ATP-binding protein GlnQ {ECO:0000313|EMBL:CRH39597.1}; TaxID=553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea ananas (Erwinia uredovora).;"
SCNpilot_expt_300_bf_scaffold_3090_curated_9
Mycobacterium aromaticivorans, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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6622..7356
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Dietzia alimentaria RepID=UPI00029A9016
hypothetical protein; K09807 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDE99415.1}; TaxID=1440774 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium aromaticivorans JS19b1 = JCM 16368.;"
SCNpilot_expt_300_bf_scaffold_3090_curated_10
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

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comp(7473..9659)
DNA (2187bp) protein (729aa)
Glycosyl hydrolase family 38 N-terminal domain protein id=2213101 bin=GWB2_Chloroflexi_54_36 species=Bacteroides oleiciplenus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
glycoside hydrolase family protein
Tax=GWB2_Chloroflexi_54_36_curated
Displaying 10 items

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