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SCNpilot_expt_300_bf_scaffold_1812_curated

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1812_curated_1
unknown

Not on your lists

comp(1..84)
DNA (84bp) protein (28aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1812_curated_2
unknown

Not on your lists

comp(118..297)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1812_curated_3
unknown

Not on your lists

comp(337..543)
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1812_curated_4
unknown

Not on your lists

comp(851..1291)
DNA (441bp) protein (147aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1812_curated_5
unknown

Not on your lists

comp(1460..1648)
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1812_curated_6
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1781..3097
DNA (1317bp) protein (439aa)
glycoside hydrolase family 3 domain-containing protein; K05349 beta-glucosidase [EC:3.2.1.21]
Glycoside hydrolase family 3 domain protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PKQ4_KRIFD
Glycoside hydrolase family 3 domain protein {ECO:0000313|EMBL:ADB32371.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
SCNpilot_expt_300_bf_scaffold_1812_curated_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3015..3779)
DNA (765bp) protein (255aa)
F420-dependent oxidoreductase n=1 Tax=Streptomyces albulus CCRC 11814 RepID=S0H3U4_STRA9
F420-dependent oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
SCNpilot_expt_300_bf_scaffold_1812_curated_8
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

3984..5342
DNA (1359bp) protein (453aa)
putative sulfatase (EC:3.1.6.-)
Putative sulfatase {ECO:0000313|EMBL:BAN00912.1}; EC=3.1.6.- {ECO:0000313|EMBL:BAN00912.1};; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
Putative sulfatase n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZWP0_9ACTN
SCNpilot_expt_300_bf_scaffold_1812_curated_9
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5391..6527
DNA (1137bp) protein (379aa)
Peptidase M50 n=1 Tax=Frankia sp. (strain CcI3) RepID=Q2J4F2_FRASC
peptidase M50
Zn-dependent protease {ECO:0000313|EMBL:KDA44217.1}; TaxID=683305 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
SCNpilot_expt_300_bf_scaffold_1812_curated_10
unknown

Not on your lists

comp(6583..6864)
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1812_curated_11
unknown

Not on your lists

6999..7217
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1812_curated_12
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7396..8358
DNA (963bp) protein (321aa)
Gram-positive signal peptide protein, YSIRK family n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SF90_9ACTO
Gram-positive signal peptide protein, YSIRK family {ECO:0000313|EMBL:EFQ82175.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
lipase class 2
SCNpilot_expt_300_bf_scaffold_1812_curated_13
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8504..9289
DNA (786bp) protein (262aa)
ABC transporter ATP-binding protein n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5HKP8_STRPR
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EDY67409.1}; TaxID=457429 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinaespiralis ATCC 25486.;"
ABC transporter; K02003 putative ABC transport system ATP-binding protein
SCNpilot_expt_300_bf_scaffold_1812_curated_14
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9304..11832
DNA (2529bp) protein (843aa)
ABC transport system integral membrane protein n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I8Q2_9ACTO
ABC transport system integral membrane protein {ECO:0000313|EMBL:EDY61457.1}; TaxID=463191 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
SCG20A.11c; ABC transporter; K02004 putative ABC transport system permease protein rbh
SCNpilot_expt_300_bf_scaffold_1812_curated_15
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11851..13077
DNA (1227bp) protein (409aa)
Histidine kinase {ECO:0000313|EMBL:EFC85386.1}; EC=2.7.13.3 {ECO:0000313|EMBL:EFC85386.1};; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
Histidine kinase n=1 Tax=Frankia sp. EUN1f RepID=D3CVA6_9ACTO
two-component system sensor kinase
SCNpilot_expt_300_bf_scaffold_1812_curated_16
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13065..13709
DNA (645bp) protein (215aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Frankia sp. EUN1f RepID=D3CVA5_9ACTO
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EFC85385.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
LuxR family transcriptional regulator
SCNpilot_expt_300_bf_scaffold_1812_curated_17
unknown

Not on your lists

14356..14508
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1812_curated_18
Janibacter hoylei, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14616..15590)
DNA (975bp) protein (325aa)
Iron/ascorbate oxidoreductase n=1 Tax=Janibacter hoylei PVAS-1 RepID=K1DZH8_9MICO
Iron/ascorbate oxidoreductase {ECO:0000313|EMBL:EKA60176.1}; TaxID=1210046 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter hoylei PVAS-1.;"
putative oxidoreductase
SCNpilot_expt_300_bf_scaffold_1812_curated_19
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15631..16518
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6YBD9_THEBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG88499.1}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
SCNpilot_expt_300_bf_scaffold_1812_curated_20
Strigamia maritima, Strigamia, Geophilomorpha, Pleurostigmophora, Arthropoda, Metazoa

Not on your lists

comp(16537..16923)
DNA (387bp) protein (129aa)
hypothetical protein, partial n=1 Tax=Micromonospora sp. CNB394 RepID=UPI000361611B
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:SMAR003175-PA}; TaxID=126957 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Myriapoda; Chilopoda; Pleurostigmophora; Geophilomorpha; Linotaeniidae; Strigamia.;" source="Strigamia maritima (European centipede) (Geophilus maritimus).;"
SCNpilot_expt_300_bf_scaffold_1812_curated_21
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16982..17467
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI00036AE1C4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG88499.1}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
SCNpilot_expt_300_bf_scaffold_1812_curated_22
Strigomonas culicis, Strigomonas, Kinetoplastida, Eukaryota

Not on your lists

comp(17486..19195)
DNA (1710bp) protein (570aa)
hypothetical protein n=1 Tax=Corynebacterium doosanense RepID=UPI0003753404
Uncharacterized protein {ECO:0000313|EMBL:EPY16195.1}; TaxID=28005 species="Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Strigomonadinae; Strigomonas.;" source="Strigomonas culicis.;"
SCNpilot_expt_300_bf_scaffold_1812_curated_23
unknown

Not on your lists

19412..19684
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1812_curated_24
unknown

Not on your lists

19694..19888
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1812_curated_25
unknown

Not on your lists

19970..20689
DNA (720bp) protein (240aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1812_curated_26
unknown

Not on your lists

comp(20532..20894)
DNA (363bp) protein (121aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1812_curated_27
unknown

Not on your lists

comp(20968..21300)
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1812_curated_28
unknown

Not on your lists

comp(21331..22119)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI00037B3BF1
SCNpilot_expt_300_bf_scaffold_1812_curated_29
unknown

Not on your lists

22277..22546
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1812_curated_30
unknown

Not on your lists

22559..22822
DNA (264bp) protein (88aa)

This feature has no annotations

Displaying items 1-30 of 33 in total

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