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SCNpilot_expt_300_bf_scaffold_971_curated

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_971_curated_1
unknown

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3..239
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_971_curated_2
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(249..2681)
DNA (2433bp) protein (811aa)
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2]
Pyruvate phosphate dikinase, PEP/pyruvate binding domain-containing protein n=1 Tax=Streptomyces sp. e14 RepID=D6KFM2_9ACTO
Phosphoenolpyruvate synthase {ECO:0000313|EMBL:KJK48228.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
SCNpilot_expt_300_bf_scaffold_971_curated_3
unknown

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comp(2867..3577)
DNA (711bp) protein (237aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_971_curated_4
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4172..5440
DNA (1269bp) protein (423aa)
LGFP repeat protein n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WEV1_KINRD
LGFP repeat-containing protein
LGFP repeat protein {ECO:0000313|EMBL:ABS05340.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
SCNpilot_expt_300_bf_scaffold_971_curated_5
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5445..6002)
DNA (558bp) protein (186aa)
transferase n=1 Tax=Pseudomonas pyrrocinia RepID=UPI0002FF7AF5
Transferase {ECO:0000313|EMBL:KGM33101.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hexapaptide repeat-containing transferase
SCNpilot_expt_300_bf_scaffold_971_curated_6
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

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6081..6350
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YWR8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM62684.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_971_curated_7
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

6578..8188
DNA (1611bp) protein (537aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7LZ06_ACIFD
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:ACU53964.1}; TaxID=525909 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidimicrobium.;" source="Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC; 103882 / ICP).;"
SCNpilot_expt_300_bf_scaffold_971_curated_8

Not on your lists

comp(8205..9020)
DNA (816bp) protein (272aa)
polyphosphate kinase n=1 Tax=Frankia sp. BCU110501 RepID=UPI000365616D
Polyphosphate kinase 2 {ECO:0000313|EMBL:BAH89785.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_971_curated_9
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9053..11500)
DNA (2448bp) protein (816aa)
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI000372237F
Uncharacterized protein {ECO:0000313|EMBL:CCM62983.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_971_curated_10
Gordonia hirsuta, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11493..12173)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Gordonia hirsuta DSM 44140 = NBRC 16056 RepID=L7LDC6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAC58761.1}; TaxID=1121927 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia hirsuta DSM 44140 = NBRC 16056.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_971_curated_11
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12247..14751)
DNA (2505bp) protein (835aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000372112B
Uncharacterized protein {ECO:0000313|EMBL:KHL19556.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
ABC transporter; K02004 putative ABC transport system permease protein
SCNpilot_expt_300_bf_scaffold_971_curated_12
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14756..14992)
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000364EABC
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KHL19555.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
ABC transporter related protein
SCNpilot_expt_300_bf_scaffold_971_curated_13
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15105..15443
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7C3J3_STRBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI10218.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
SCNpilot_expt_300_bf_scaffold_971_curated_14
unknown

Not on your lists

15896..16111
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_971_curated_15
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16146..18200)
DNA (2055bp) protein (685aa)
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI000372237F
Uncharacterized protein {ECO:0000313|EMBL:CCM62983.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_971_curated_16
Nocardia vulneris, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18522..19205
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0EPC1_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:KIA62476.1}; TaxID=1141657 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia vulneris.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_971_curated_17
unknown

Not on your lists

comp(19295..20257)
DNA (963bp) protein (321aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_971_curated_18
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20254..20898)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNS335 RepID=UPI00037C853B
RNA polymerase sigma70 factor {ECO:0000313|EMBL:AKH86565.1}; TaxID=444103 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
RNA polymerase sigma (70) factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_expt_300_bf_scaffold_971_curated_19
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21033..21608)
DNA (576bp) protein (192aa)
Deaminase-reductase domain-containing protein n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5H682_STRPR
Deaminase-reductase domain-containing protein {ECO:0000313|EMBL:EDY62343.1}; TaxID=457429 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinaespiralis ATCC 25486.;"
bifunctional deaminase-reductase domain-containing protein
SCNpilot_expt_300_bf_scaffold_971_curated_20
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21754..22761
DNA (1008bp) protein (336aa)
RNA polymerase sigma70 factor n=1 Tax=Nocardia sp. BMG111209 RepID=UPI00036F6CF5
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:CDX19621.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_expt_300_bf_scaffold_971_curated_21
Streptomyces zinciresistens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22774..25305)
DNA (2532bp) protein (844aa)
prpA1; serine/threonine protein phosphatase; K01090 protein phosphatase [EC:3.1.3.16] rbh
phosphatase n=1 Tax=Streptomyces violaceoniger RepID=UPI0003C774AE
Phosphatase {ECO:0000313|EMBL:EGX58351.1}; TaxID=700597 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces zinciresistens K42.;"
SCNpilot_expt_300_bf_scaffold_971_curated_22
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

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comp(25302..26240)
DNA (939bp) protein (313aa)
type 12 methyltransferase n=1 Tax=Xanthomonas sacchari RepID=UPI000262A387
Methyltransferase type 12 {ECO:0000313|EMBL:KIF12514.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
ubiE2; double-stranded RNA 3-methylase
Displaying 22 items

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