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SCNpilot_expt_300_bf_scaffold_1856_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1856_curated_1
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..217
DNA (216bp) protein (72aa)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:EHB55616.1}; EC=1.3.8.1 {ECO:0000313|EMBL:EHB55616.1};; TaxID=931627 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae JS60.;"
Butyryl-CoA dehydrogenase n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4HZ80_MYCRH
SCNpilot_expt_300_bf_scaffold_1856_curated_2
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(728..1120)
DNA (393bp) protein (131aa)
Transcriptional regulator, ArsR family n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S642_GEOOG
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ADB73259.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCNpilot_expt_300_bf_scaffold_1856_curated_3
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1709..2188)
DNA (480bp) protein (160aa)
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:KGD57625.1}; TaxID=28450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (Pseudomonas pseudomallei).;"
SCNpilot_expt_300_bf_scaffold_1856_curated_4
unknown

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comp(2435..2815)
DNA (381bp) protein (127aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1856_curated_5
unknown

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2900..3292
DNA (393bp) protein (131aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1856_curated_6
unknown

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3461..3634
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1856_curated_7
unknown

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3746..3868
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1856_curated_8
unknown

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3872..3964
DNA (93bp) protein (31aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1856_curated_9
unknown

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4031..4222
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1856_curated_10
unknown

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comp(4787..5032)
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1856_curated_11
unknown

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comp(5212..5463)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1856_curated_12
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

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5835..6836
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YWI8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM62348.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
hypothetical protein rbh
SCNpilot_expt_300_bf_scaffold_1856_curated_13
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6833..7351
DNA (519bp) protein (173aa)
N-acetyltransferase GCN5; K03823 phosphinothricin acetyltransferase [EC:2.3.1.183]
GCN5-related N-acetyltransferase n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BH60_RALP1
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACS64434.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
SCNpilot_expt_300_bf_scaffold_1856_curated_14
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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7348..7962
DNA (615bp) protein (205aa)
Hydrolase n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B8F1_STRRD
hydrolase; K07025 putative hydrolase of the HAD superfamily
Hydrolase {ECO:0000313|EMBL:ACZ87761.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_expt_300_bf_scaffold_1856_curated_15
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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7973..9031
DNA (1059bp) protein (353aa)
Peptidase metallopeptidase n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RW01_BLASD
peptidase metallopeptidase
Peptidase metallopeptidase {ECO:0000313|EMBL:CCG05831.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
SCNpilot_expt_300_bf_scaffold_1856_curated_16
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

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comp(9121..10338)
DNA (1218bp) protein (406aa)
Thiolase {ECO:0000313|EMBL:CCM66025.1}; EC=2.3.1.- {ECO:0000313|EMBL:CCM66025.1};; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
acetyl-CoA acetyltransferase (EC:2.3.1.16); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Thiolase n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z5M9_9ACTN
Displaying 16 items

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