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SCNpilot_expt_300_bf_scaffold_1373_curated

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1373_curated_1
actinobacterium acAcidi, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..887
DNA (885bp) protein (295aa)
Luciferase-like, subgroup n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J904_FRASU
Uncharacterized protein {ECO:0000313|EMBL:KGA10163.1}; TaxID=1504320 species="Bacteria; Actinobacteria.;" source="actinobacterium acAcidi.;"
luciferase
SCNpilot_expt_300_bf_scaffold_1373_curated_2
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1011..1679)
DNA (669bp) protein (223aa)
Putative transcriptional regulator n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4ALC6_9ACTN
Putative transcriptional regulator {ECO:0000313|EMBL:EAR23813.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
TetR family transcriptional regulator
SCNpilot_expt_300_bf_scaffold_1373_curated_3
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1728..2846
DNA (1119bp) protein (373aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XG19_NAKMY
alcohol dehydrogenase zinc-binding domain-containing protein
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ACV80021.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_expt_300_bf_scaffold_1373_curated_4
unknown

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3566..3988
DNA (423bp) protein (141aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1373_curated_5
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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4028..5029
DNA (1002bp) protein (334aa)
glycerophosphodiester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:ABG03283.1}; EC=3.1.4.46 {ECO:0000313|EMBL:ABG03283.1};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Glycerophosphodiester phosphodiesterase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZ95_RUBXD
SCNpilot_expt_300_bf_scaffold_1373_curated_6
unknown

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5513..6529
DNA (1017bp) protein (339aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1373_curated_7
Jannaschia aquimarina, Jannaschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6598..7683)
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002DE2DA2
Jannaschia aquimarina strain GSW-M26 jaqu_contig000048, whole genome shotgun sequence {ECO:0000313|EMBL:KIT15621.1}; TaxID=935700 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia.;" source="Jannaschia aquimarina.;"
Allergen V5/Tpx-1 related
SCNpilot_expt_300_bf_scaffold_1373_curated_8
unknown

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8290..8703
DNA (414bp) protein (138aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1373_curated_9
Streptomyces niveus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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8717..9643
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Streptomyces niveus NCIMB 11891 RepID=V6JNZ1_STRNV
Uncharacterized protein {ECO:0000313|EMBL:EST18554.1}; TaxID=1352941 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
DNA polymerase LigD ligase subunit
SCNpilot_expt_300_bf_scaffold_1373_curated_10
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(9688..10239)
DNA (552bp) protein (184aa)
Flavin reductase domain protein FMN-binding protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3JDG7_FRASU
flavin reductase domain-containing FMN-binding protein
Flavin reductase domain protein FMN-binding protein {ECO:0000313|EMBL:ADP83600.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_expt_300_bf_scaffold_1373_curated_11
unknown

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comp(10253..10672)
DNA (420bp) protein (140aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1373_curated_12
unknown

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comp(10763..11350)
DNA (588bp) protein (196aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1373_curated_13
unknown

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comp(11807..12226)
DNA (420bp) protein (140aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1373_curated_14
unknown

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comp(12281..12517)
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1373_curated_15
unknown

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comp(12632..13138)
DNA (507bp) protein (169aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1373_curated_16
unknown

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comp(13175..13693)
DNA (519bp) protein (173aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1373_curated_17
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13939..14703
DNA (765bp) protein (255aa)
ATP dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
ATP dependent DNA ligase {ECO:0000313|EMBL:CAM03450.1}; EC=6.5.1.1 {ECO:0000313|EMBL:CAM03450.1};; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
ATP-dependent DNA ligase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002625970
SCNpilot_expt_300_bf_scaffold_1373_curated_18
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14717..15526)
DNA (810bp) protein (270aa)
Probable DNA repair protein BLASA_1744 n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RNB5_BLASD
putative DNA end-binding protein Ku; K10979 DNA end-binding protein Ku
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
SCNpilot_expt_300_bf_scaffold_1373_curated_19
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15866..16597)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1HX72_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EOD68150.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1373_curated_20
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17185..18063
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000370E7DA
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ADD41387.1}; Flags: Precursor;; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
SCNpilot_expt_300_bf_scaffold_1373_curated_21
uncultured Frankia sp., Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18239..18376)
DNA (138bp) protein (46aa)
CAZy families CE1 protein {ECO:0000313|EMBL:AIA92428.1}; TaxID=181582 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia; environmental samples.;" source="uncultured Frankia sp.;"
SCNpilot_expt_300_bf_scaffold_1373_curated_22
Human herpesvirus 4, Lymphocryptovirus, Herpesvirales, Viruses

Not on your lists

18579..19517
DNA (939bp) protein (313aa)
Epstein-Barr nuclear antigen 1 n=4 Tax=Epstein-Barr virus (strain GD1) RepID=EBNA1_EBVB9
EBNA-1 {ECO:0000313|EMBL:AGL80702.1}; TaxID=10376 species="Viruses; dsDNA viruses, no RNA stage; Herpesvirales; Herpesviridae; Gammaherpesvirinae; Lymphocryptovirus.;" source="Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4).;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1373_curated_23
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19340..20683)
DNA (1344bp) protein (448aa)
Non-hemolytic phospholipase C {ECO:0000313|EMBL:AHH95673.1}; EC=3.1.4.3 {ECO:0000313|EMBL:AHH95673.1};; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
Non-hemolytic phospholipase C n=2 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=G8XDS3_STREN
Non-hemolytic phospholipase C
SCNpilot_expt_300_bf_scaffold_1373_curated_24
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20705..21871)
DNA (1167bp) protein (389aa)
Regulatory protein n=1 Tax=Rhodococcus ruber BKS 20-38 RepID=M2WWY1_9NOCA
Regulatory protein {ECO:0000313|EMBL:EME53256.1}; TaxID=1278076 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber BKS 20-38.;"
serine/threonine phosphatase
SCNpilot_expt_300_bf_scaffold_1373_curated_25
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21868..22671)
DNA (804bp) protein (268aa)
Alpha/beta hydrolase fold protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SD39_GEOOG
Sigma factor sigB regulation protein rsbQ {ECO:0000313|EMBL:EYR62169.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
alpha/beta hydrolase fold protein
SCNpilot_expt_300_bf_scaffold_1373_curated_26
unknown

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comp(22732..23208)
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1373_curated_27
unknown

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comp(23227..23355)
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1373_curated_28
unknown

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comp(23383..23562)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1373_curated_29
BJP_IG2157_Actinomycetales_63_19, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

24728..25111
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003729EDC
Tax=BJP_IG2157_Actinomycetales_63_19
SCNpilot_expt_300_bf_scaffold_1373_curated_30
unknown

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comp(25319..26305)
DNA (987bp) protein (329aa)

This feature has no annotations

Displaying items 1-30 of 31 in total

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