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SCNpilot_expt_300_bf_scaffold_1310_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1310_curated_1
unknown

Not on your lists

comp(1..222)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1310_curated_2
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

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573..1481
DNA (909bp) protein (303aa)
Putative short-chain dehydrogenase/reductase n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z2W4_9ACTN
Putative short-chain dehydrogenase/reductase {ECO:0000313|EMBL:CCM63626.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
putative oxidoreductase
SCNpilot_expt_300_bf_scaffold_1310_curated_3
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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1485..2348
DNA (864bp) protein (288aa)
htdY; putative 3-hydroxyacyl-thioester dehydratase (EC:4.2.1.-)
Putative 3-hydroxyacyl-thioester dehydratase {ECO:0000313|EMBL:BAN01896.1}; EC=4.2.1.- {ECO:0000313|EMBL:BAN01896.1};; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
Putative 3-hydroxyacyl-thioester dehydratase n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A0H9_9ACTN
SCNpilot_expt_300_bf_scaffold_1310_curated_4
Mycobacterium nebraskense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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2348..3550
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Mycobacterium xenopi RIVM700367 RepID=I0RK28_MYCXE
Cytochrome P450 {ECO:0000313|EMBL:KKC03882.1}; TaxID=244292 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium nebraskense.;"
cytochrome P450 family protein
SCNpilot_expt_300_bf_scaffold_1310_curated_5
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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3571..5637
DNA (2067bp) protein (689aa)
Uncharacterized protein n=1 Tax=Microcystis aeruginosa PCC 9717 RepID=I4FSJ9_MICAE
Uncharacterized protein {ECO:0000313|EMBL:CCH98624.1}; TaxID=1160286 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 9717.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1310_curated_6
unknown

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comp(5768..6157)
DNA (390bp) protein (130aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1310_curated_7
unknown

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comp(6356..6550)
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1310_curated_8
unknown

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comp(7312..7731)
DNA (420bp) protein (140aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1310_curated_9
unknown

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7846..8349
DNA (504bp) protein (168aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1310_curated_10
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(8356..9129)
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UH22_CELFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG73225.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_expt_300_bf_scaffold_1310_curated_11
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9131..9733)
DNA (603bp) protein (201aa)
Endonuclease NucS {ECO:0000256|HAMAP-Rule:MF_00722}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00722};; TaxID=1427391 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YW14_9ACTN
hypothetical protein; K07503 hypothetical protein
SCNpilot_expt_300_bf_scaffold_1310_curated_12
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9758..11365)
DNA (1608bp) protein (536aa)
ABC-1 domain protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YVL8_9ACTN
ABC-1 domain protein {ECO:0000313|EMBL:CCM62064.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
ABC-1 domain-containing protein
SCNpilot_expt_300_bf_scaffold_1310_curated_13
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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11438..13708
DNA (2271bp) protein (757aa)
Putative PAS/PAC sensor protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARZ9_RUBXD
PAS domain S-box protein {ECO:0000313|EMBL:AHY45611.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
putative PAS/PAC sensor protein
SCNpilot_expt_300_bf_scaffold_1310_curated_14
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13764..15953
DNA (2190bp) protein (730aa)
stage II sporulation protein E n=1 Tax=Salinispora pacifica RepID=UPI0003672FBD
stage II sporulation protein E
Stage II sporulation protein E {ECO:0000313|EMBL:ADL43895.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
SCNpilot_expt_300_bf_scaffold_1310_curated_15
Mycobacterium setense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15961..16755
DNA (795bp) protein (265aa)
inositol monophosphatase; K01082 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
Inositol monophosphatase n=1 Tax=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) RepID=A1TDE7_MYCVP
MFS transporter {ECO:0000313|EMBL:KHO18358.1}; TaxID=431269 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium setense.;"
SCNpilot_expt_300_bf_scaffold_1310_curated_16
marine actinobacterium MedAcidi-G2B, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16884..17795
DNA (912bp) protein (304aa)
Sulfate adenylyltransferase {ECO:0000256|SAAS:SAAS00055732}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055732};; TaxID=1550401 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G2B.;"
cysD; sulfate adenylyltransferase subunit 2 (EC:2.7.7.4); K00957 sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
ATP-sulfurylase, subunit 2 (ATP:sulfate adenylyltransferase) n=1 Tax=Frankia alni (strain ACN14a) RepID=Q0RNX9_FRAAA
SCNpilot_expt_300_bf_scaffold_1310_curated_17
marine actinobacterium MedAcidi-G2B, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17795..18580
DNA (786bp) protein (262aa)
cysN; sulfate adenylyltransferase, large subunit (EC:2.7.7.4)
Sulfate adenylyltransferase subunit 1 {ECO:0000256|SAAS:SAAS00056000}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055979};; TaxID=1550401 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G2B.;"
sulfate adenylyltransferase n=1 Tax=Nocardiopsis alba RepID=UPI000349268A
Displaying 17 items

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