ggKbase home page

SCNpilot_expt_300_bf_scaffold_2872_curated

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_2872_curated_1
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1..1389)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Microcystis aeruginosa PCC 9443 RepID=I4G4C7_MICAE
Uncharacterized protein {ECO:0000313|EMBL:CCI02788.1}; TaxID=1160281 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 9443.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_2872_curated_2
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1420..3012)
DNA (1593bp) protein (531aa)
Membrane protein-like protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SLR7_NOCSJ
hypothetical protein
Membrane protein-like protein {ECO:0000313|EMBL:ABL82752.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
SCNpilot_expt_300_bf_scaffold_2872_curated_3
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3014..3457)
DNA (444bp) protein (148aa)
TadE family protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SLR8_NOCSJ
TadE family protein
TadE family protein {ECO:0000313|EMBL:ABL82753.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
SCNpilot_expt_300_bf_scaffold_2872_curated_4
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(3454..4197)
DNA (744bp) protein (248aa)
Type II secretion system protein id=4803559 bin=GWC2_Chloroflexi_73_18 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
type II secretion system protein; K12511 tight adherence protein C
Tax=GWC2_RIF_CHLX_73_18_curated
SCNpilot_expt_300_bf_scaffold_2872_curated_5
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4379..5344)
DNA (966bp) protein (322aa)
type II secretion system protein F n=1 Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI0003812DAD
Uncharacterized protein {ECO:0000313|EMBL:KGJ77130.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
type II secretion system protein; K12510 tight adherence protein B
SCNpilot_expt_300_bf_scaffold_2872_curated_6
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5341..6204)
DNA (864bp) protein (288aa)
Pilus assembly protein CpaF {ECO:0000313|EMBL:KGJ77129.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
Type II secretion system protein E id=7721515 bin=CNBR_ACT species=Geodermatophilus obscurus genus=Geodermatophilus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
type II secretion system protein E; K02283 pilus assembly protein CpaF
SCNpilot_expt_300_bf_scaffold_2872_curated_7
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6677..7138)
DNA (462bp) protein (154aa)
Cobyrinic acid a,c-diamide synthase n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTI8_ACIC1
cobyrinic acid a,c-diamide synthase; K02282 pilus assembly protein CpaE
Cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:ABK52748.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
SCNpilot_expt_300_bf_scaffold_2872_curated_8
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7898..8677)
DNA (780bp) protein (260aa)
Tax=CG_Solirubrobact_01
SCNpilot_expt_300_bf_scaffold_2872_curated_9
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9004..10182
DNA (1179bp) protein (393aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YVR7_9ACTN
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:CCM61878.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
moeB; putative molybdopterin synthase sulfurylase MoeB
SCNpilot_expt_300_bf_scaffold_2872_curated_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10230..10868
DNA (639bp) protein (213aa)
PPOX class probable FMN-dependent enzyme, DR_2398 family n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZ39_9RHIZ
PPOX class F420-dependent protein; K07006
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_expt_300_bf_scaffold_2872_curated_11
unknown

Not on your lists

10899..11054
DNA (156bp) protein (52aa)

This feature has no annotations

Displaying 11 items

View Taxonomy