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SCNpilot_expt_300_bf_scaffold_5443_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_5443_curated_1
unknown

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2..226
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_5443_curated_2
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

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240..1385
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z4Z3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM65765.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_5443_curated_3
actinobacterium acAcidi, Actinobacteria, Actinobacteria, Bacteria

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1560..2447
DNA (888bp) protein (296aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1504320 species="Bacteria; Actinobacteria.;" source="actinobacterium acAcidi.;"
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZZ98_9ACTN
SCNpilot_expt_300_bf_scaffold_5443_curated_4
unknown

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comp(2686..2847)
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_5443_curated_5
actinobacterium acAcidi, Actinobacteria, Actinobacteria, Bacteria

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2919..4049
DNA (1131bp) protein (377aa)
ribonuclease J (EC:3.1.-.-)
Ribonuclease J n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A0A0_9ACTN
Ribonuclease J {ECO:0000313|EMBL:KGA11301.1}; TaxID=1504320 species="Bacteria; Actinobacteria.;" source="actinobacterium acAcidi.;"
SCNpilot_expt_300_bf_scaffold_5443_curated_6
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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4307..6085
DNA (1779bp) protein (593aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NKR2_ROSCS
Strain A contig00053, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ54230.1}; TaxID=277 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus ruber.;"
hypothetical protein; K07093
SCNpilot_expt_300_bf_scaffold_5443_curated_7
unknown

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comp(6054..6932)
DNA (879bp) protein (293aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_5443_curated_8
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(7355..7744)
DNA (390bp) protein (130aa)
Putative uncharacterized protein id=3866950 bin=GWF2_Geobacter_54_21 species=Burkholderia pseudomallei genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
Tax=RBG_16_Actinobacteria_67_15_curated
SCNpilot_expt_300_bf_scaffold_5443_curated_9
actinobacterium acAcidi, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7978..8652
DNA (675bp) protein (225aa)
Putative DNA translocase FtsK n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z7M6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGA11303.1}; TaxID=1504320 species="Bacteria; Actinobacteria.;" source="actinobacterium acAcidi.;"
ftsK; DNA translocase FtsK
SCNpilot_expt_300_bf_scaffold_5443_curated_10
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8741..9034
DNA (294bp) protein (98aa)
Glutaredoxin/malate transporter fusion protein n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3QBW7_STANL
glutaredoxin/malate transporter fusion protein
Glutaredoxin/malate transporter fusion protein {ECO:0000313|EMBL:ADD44856.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
SCNpilot_expt_300_bf_scaffold_5443_curated_11
unknown

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comp(9237..9638)
DNA (402bp) protein (134aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_5443_curated_12
unknown

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9899..10096
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_5443_curated_13
unknown

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10262..10465
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_5443_curated_14
unknown

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10592..10936
DNA (345bp) protein (115aa)

This feature has no annotations

Displaying 14 items

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