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SCNpilot_expt_300_bf_scaffold_2178_curated

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_2178_curated_1
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..562
DNA (561bp) protein (187aa)
undecaprenyl pyrophosphate phosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=234621 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis (strain PR4 / NBRC 100887).;"
UDP pyrophosphate phosphatase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5E710
SCNpilot_expt_300_bf_scaffold_2178_curated_2
unknown

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comp(566..1216)
DNA (651bp) protein (217aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_2178_curated_3
GWC2_OD1_45_8, Magasanikbacteria, Parcubacteria, Bacteria

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comp(1330..2136)
DNA (807bp) protein (269aa)
methylthioadenosine phosphorylase; K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
Purine nucleoside phosphorylase n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CLU2_SYNLT
Uncharacterized protein {ECO:0000313|EMBL:KKU13608.1}; TaxID=1619050 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWC2_45_8.;"
SCNpilot_expt_300_bf_scaffold_2178_curated_4
Brevibacterium mcbrellneri, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2140..2511)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Nesterenkonia alba RepID=UPI0003B782E4
Putative regulatory protein (CxxC_CxxC_SSSS) {ECO:0000313|EMBL:EFG46891.1}; TaxID=585530 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium mcbrellneri ATCC 49030.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_2178_curated_5
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2614..3492
DNA (879bp) protein (293aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
UTP-glucose-1-phosphate uridylyltransferase; K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI000365A356
SCNpilot_expt_300_bf_scaffold_2178_curated_6
marine actinobacterium MedAcidi-G3, Actinobacteria, Actinobacteria, Bacteria

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3497..4726
DNA (1230bp) protein (410aa)
Molybdopterin biosynthesis protein MoeA n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZY22_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KIE53414.1}; TaxID=1550402 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G3.;"
moeA; molybdopterin biosynthesis protein MoeA
SCNpilot_expt_300_bf_scaffold_2178_curated_7
marine actinobacterium MedAcidi-G2B, Actinobacteria, Actinobacteria, Bacteria

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4880..5920
DNA (1041bp) protein (347aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225, ECO:0000256|SAAS:SAAS00064088};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_01225}; TaxID=1550401 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G2B.;"
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI00035D43C1
moaA; molybdenum cofactor biosynthesis protein MoaA
SCNpilot_expt_300_bf_scaffold_2178_curated_8
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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5981..6484
DNA (504bp) protein (168aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M1C0_ACIFD
molybdenum cofactor biosynthesis protein C; K03637 molybdenum cofactor biosynthesis protein C
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Ferrimicrobium acidiphilum DSM 19497.;"
SCNpilot_expt_300_bf_scaffold_2178_curated_9
unknown

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6737..7225
DNA (489bp) protein (163aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_2178_curated_10
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

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7422..7910
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z4G8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM65590.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
Allergen V5/Tpx-1 family protein
SCNpilot_expt_300_bf_scaffold_2178_curated_11
marine actinobacterium MedAcidi-G2A, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9022..9621
DNA (600bp) protein (200aa)
Ferredoxin reductase n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZW12_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KIE49722.1}; TaxID=1550400 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G2A.;"
ferredoxin reductase
SCNpilot_expt_300_bf_scaffold_2178_curated_12

Not on your lists

9618..10211
DNA (594bp) protein (198aa)
NUDIX hydrolase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RED3_DESPD
Uncharacterized protein {ECO:0000313|EMBL:KGA13043.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
NUDIX hydrolase
SCNpilot_expt_300_bf_scaffold_2178_curated_13
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

10244..10879
DNA (636bp) protein (212aa)
hypothetical protein id=14630292 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
Tax=CSP1_4_Chloroflexi
SCNpilot_expt_300_bf_scaffold_2178_curated_14
unknown

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comp(11007..11261)
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_2178_curated_15
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11371..11916)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YYE4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM63599.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_2178_curated_16
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12472..15045)
DNA (2574bp) protein (858aa)
putative aminopeptidase (EC:3.4.11.-)
Uncharacterized protein {ECO:0000313|EMBL:ETX02787.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Putative Peptidase M1, membrane alanine aminopeptidase id=4217952 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
SCNpilot_expt_300_bf_scaffold_2178_curated_17
unknown

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comp(15137..15766)
DNA (630bp) protein (210aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_2178_curated_18
unknown

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comp(15925..16029)
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_2178_curated_19
unknown

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comp(16147..16299)
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_2178_curated_20
unknown

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comp(16390..16575)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_2178_curated_21
unknown

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comp(16582..16737)
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_2178_curated_22
Streptomyces mutabilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16958..17791
DNA (834bp) protein (278aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=67332 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mutabilis.;"
purine nucleotide phosphorylase (EC:2.4.2.1); K03783 purine-nucleoside phosphorylase [EC:2.4.2.1]
purine nucleoside phosphorylase n=1 Tax=Streptomyces sp. TOR3209 RepID=UPI00036CDFB0
SCNpilot_expt_300_bf_scaffold_2178_curated_23
unknown

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comp(17763..18167)
DNA (405bp) protein (135aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_2178_curated_24
Dictyostelium discoideum, Dictyostelium, Dictyosteliida, Eukaryota

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comp(18444..18932)
DNA (489bp) protein (163aa)
Spore coat protein SP96 n=1 Tax=Dictyostelium discoideum RepID=SP96_DICDI
cotA; spore coat protein sp96
Spore coat protein SP96; TaxID=44689 species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium.;" source="Dictyostelium discoideum (Slime mold).;"
SCNpilot_expt_300_bf_scaffold_2178_curated_25
Streptomyces griseoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19109..19447
DNA (339bp) protein (113aa)
pmmB; phosphomannomutase; K01840 phosphomannomutase [EC:5.4.2.8]
Phosphomannomutase n=1 Tax=Streptomyces griseoflavus Tu4000 RepID=D9XTJ2_9ACTO
Phosphomannomutase {ECO:0000313|EMBL:EFL39505.1}; TaxID=467200 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoflavus Tu4000.;"
SCNpilot_expt_300_bf_scaffold_2178_curated_26
unknown

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comp(20092..20253)
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_2178_curated_27
unknown

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20355..20945
DNA (591bp) protein (197aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_2178_curated_28
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21087..21845)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00036F72FB
Uncharacterized protein {ECO:0000313|EMBL:EWC58309.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_2178_curated_29
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21905..22528)
DNA (624bp) protein (208aa)
Uracil phosphoribosyltransferase {ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|SAAS:SAAS00084480};; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z337_9ACTN
SCNpilot_expt_300_bf_scaffold_2178_curated_30
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22661..23320
DNA (660bp) protein (220aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=72000 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila.;"
deoC; deoxyribose-phosphate aldolase (EC:4.1.2.4); K01619 deoxyribose-phosphate aldolase [EC:4.1.2.4]
deoxyribose-phosphate aldolase n=1 Tax=Kocuria rhizophila RepID=UPI0003604248
Displaying items 1-30 of 31 in total

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