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SCNpilot_expt_300_bf_scaffold_986_curated

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_986_curated_1
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

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comp(2..1030)
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI000374FA7F
Putative Peptidase S15 {ECO:0000313|EMBL:CCM63332.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
peptidase S15
SCNpilot_expt_300_bf_scaffold_986_curated_2
Rhodococcus triatomae, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1073..1450)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Rhodococcus triatomae BKS 15-14 RepID=M2XCP9_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:EME21403.1}; TaxID=1278078 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus triatomae BKS 15-14.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_986_curated_3
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1965..2735)
DNA (771bp) protein (257aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AYM4_STRRD
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACZ89007.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_expt_300_bf_scaffold_986_curated_4
Streptomyces iranensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2732..3364)
DNA (633bp) protein (211aa)
Carboxymuconolactone decarboxylase n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=D9XDC5_STRVR
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:CDR05236.1}; TaxID=576784 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces iranensis.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_986_curated_5
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3436..4986
DNA (1551bp) protein (517aa)
Propionyl-CoA carboxylase beta chain {ECO:0000313|EMBL:CCM62949.1}; EC=6.4.1.3 {ECO:0000313|EMBL:CCM62949.1};; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
pccB; putative propionyl-CoA carboxylase beta chain (EC:6.4.1.3)
Propionyl-CoA carboxylase beta chain n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YX78_9ACTN
SCNpilot_expt_300_bf_scaffold_986_curated_6
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4983..5168
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YXL9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM62950.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
SCNpilot_expt_300_bf_scaffold_986_curated_7
unknown

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comp(5173..5361)
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_986_curated_8
unknown

Not on your lists

5437..5580
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_986_curated_9
unknown

Not on your lists

comp(5669..6043)
DNA (375bp) protein (125aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_986_curated_10
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6112..8643
DNA (2532bp) protein (844aa)
Transcriptional regulator, LuxR family n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3PXQ3_STANL
LuxR family transcriptional regulator {ECO:0000313|EMBL:KHD73548.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
LuxR family transcriptional regulator
SCNpilot_expt_300_bf_scaffold_986_curated_11
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8640..9143)
DNA (504bp) protein (168aa)
Regulatory protein LuxR n=1 Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SAB0_ACTS5
regulatory protein LuxR
Regulatory protein LuxR {ECO:0000313|EMBL:AEV85225.1}; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
SCNpilot_expt_300_bf_scaffold_986_curated_12
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9213..10259
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z0Y9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM62951.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_986_curated_13
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10273..10902
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WFK8_KINRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS05597.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
SCNpilot_expt_300_bf_scaffold_986_curated_14
unknown

Not on your lists

10964..11782
DNA (819bp) protein (273aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_986_curated_15
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

11809..12969
DNA (1161bp) protein (387aa)
putative CoA-transferase (EC:2.8.3.-)
Putative CoA-transferase {ECO:0000313|EMBL:BAN00572.1}; EC=2.8.3.- {ECO:0000313|EMBL:BAN00572.1};; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
Putative CoA-transferase n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZVR1_9ACTN
SCNpilot_expt_300_bf_scaffold_986_curated_16
unknown

Not on your lists

comp(13377..13562)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_986_curated_17
unknown

Not on your lists

comp(13806..14063)
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_986_curated_18
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

14540..17812
DNA (3273bp) protein (1091aa)
Ig family protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RC5_SOLUE
Ig family protein
Ig family protein {ECO:0000313|EMBL:ABJ87795.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SCNpilot_expt_300_bf_scaffold_986_curated_19
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17922..19172
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI00037191EA
Uncharacterized protein {ECO:0000313|EMBL:CCM63107.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
SCNpilot_expt_300_bf_scaffold_986_curated_20
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19253..19498)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YXM2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM62955.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
Displaying 20 items

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