ggKbase home page

SCNpilot_expt_300_bf_scaffold_3148_curated

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_3148_curated_1
unknown

Not on your lists

comp(2..160)
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_3148_curated_2
unknown

Not on your lists

691..1413
DNA (723bp) protein (241aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_3148_curated_3
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1739..3070
DNA (1332bp) protein (444aa)
Integrase family protein n=1 Tax=Amycolatopsis mediterranei (strain S699) RepID=G0FQX2_AMYMS
integrase family protein
Integrase family protein {ECO:0000313|EMBL:AEK44396.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
SCNpilot_expt_300_bf_scaffold_3148_curated_4
unknown

Not on your lists

comp(3544..4407)
DNA (864bp) protein (288aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_3148_curated_5
unknown

Not on your lists

4809..5063
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_3148_curated_6
unknown

Not on your lists

comp(5193..5444)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_3148_curated_7
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5450..6412)
DNA (963bp) protein (321aa)
Luciferase-like protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYS0_RUBXD
luciferase-like protein
Luciferase-like protein {ECO:0000313|EMBL:ABG03458.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
SCNpilot_expt_300_bf_scaffold_3148_curated_8
Olsenella sp. oral taxon 809, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6467..7456)
DNA (990bp) protein (330aa)
RNA polymerase sigma factor n=1 Tax=Olsenella sp. oral taxon 809 str. F0356 RepID=G5F4B2_9ACTN
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=661087 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella sp. oral taxon 809 str. F0356.;"
sig1; RNA polymerase sigma factor; K03090 RNA polymerase sigma-B factor
SCNpilot_expt_300_bf_scaffold_3148_curated_9
unknown

Not on your lists

7545..7880
DNA (336bp) protein (112aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_3148_curated_10
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8401..8946
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Curtobacterium flaccumfaciens RepID=UPI000375E42C
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:AIY15718.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
RNA polymerase sigma factor SigK; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_expt_300_bf_scaffold_3148_curated_11
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9159..9479)
DNA (321bp) protein (107aa)
Uncharacterized protein {ECO:0000313|EMBL:KGN30812.1}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
Displaying 11 items

View Taxonomy