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SCNpilot_expt_300_bf_scaffold_1563_curated

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1563_curated_1
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..751
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EUA7_MODMB
Uncharacterized protein {ECO:0000313|EMBL:KHK95906.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1563_curated_2
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2033..3325)
DNA (1293bp) protein (431aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNB091 RepID=UPI00037E15CF
Uncharacterized protein {ECO:0000313|EMBL:AJF68732.1}; TaxID=362257 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
LuxR family transcriptional regulator fused with ATPase domain
SCNpilot_expt_300_bf_scaffold_1563_curated_3
unknown

Not on your lists

3510..4688
DNA (1179bp) protein (393aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1563_curated_4
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4698..5570
DNA (873bp) protein (291aa)
DNA polymerase LigD, polymerase domain-containing protein n=1 Tax=Streptomyces sp. AA4 RepID=D9V1M5_9ACTO
ATP-dependent DNA ligase {ECO:0000313|EMBL:ETK31903.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
DNA polymerase LigD, polymerase domain-containing protein
SCNpilot_expt_300_bf_scaffold_1563_curated_5
Arthrobacter siccitolerans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5994..7901
DNA (1908bp) protein (636aa)
ATP-binding region, ATPase domain protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SFP8_NOCSJ
Response regulator {ECO:0000313|EMBL:CCQ47110.1}; TaxID=861266 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter siccitolerans.;"
ATPase domain-containing protein
SCNpilot_expt_300_bf_scaffold_1563_curated_6
Methylophaga thiooxydans, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8006..8248
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Methylophaga thiooxydans DMS010 RepID=C0N2C7_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EEF81309.1}; TaxID=637616 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga thiooxydans DMS010.;"
multi-sensor hybrid histidine kinase
SCNpilot_expt_300_bf_scaffold_1563_curated_7
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8261..9400)
DNA (1140bp) protein (380aa)
Putative oxidoreductase n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XI33_MICPN
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAK35702.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
SCNpilot_expt_300_bf_scaffold_1563_curated_8

Not on your lists

comp(9474..9806)
DNA (333bp) protein (111aa)
Bacterial regulatory protein, ArsR domain protein n=1 Tax=mine drainage metagenome RepID=T0ZVC3_9ZZZZ
Bacterial regulatory protein, ArsR domain protein {ECO:0000313|EMBL:EQD33880.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ArsR-family transcriptional regulator
SCNpilot_expt_300_bf_scaffold_1563_curated_9
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9900..10355
DNA (456bp) protein (152aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8KXC0_FRASN
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABW10023.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
SCNpilot_expt_300_bf_scaffold_1563_curated_10
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10851..11273
DNA (423bp) protein (141aa)
Uncharacterized protein n=2 Tax=Mycobacterium abscessus RepID=B1MME3_MYCA9
Uncharacterized protein {ECO:0000313|EMBL:GAM47131.1}; TaxID=37332 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1563_curated_11
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11348..12754
DNA (1407bp) protein (469aa)
Sugar transporter n=1 Tax=Micromonospora sp. (strain L5) RepID=E8S4M5_MICSL
sugar transporter
Sugar transporter {ECO:0000313|EMBL:ADL48042.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
SCNpilot_expt_300_bf_scaffold_1563_curated_12
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12805..14751
DNA (1947bp) protein (649aa)
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z225_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM63286.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1563_curated_13
Mobilicoccus pelagius, Mobilicoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14753..16375)
DNA (1623bp) protein (541aa)
Putative metalloendopeptidase n=1 Tax=Mobilicoccus pelagius NBRC 104925 RepID=H5UTA7_9MICO
Putative metalloendopeptidase {ECO:0000313|EMBL:GAB48965.1}; TaxID=1089455 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Mobilicoccus.;" source="Mobilicoccus pelagius NBRC 104925.;"
putative metalloendopeptidase
SCNpilot_expt_300_bf_scaffold_1563_curated_14
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16693..17175)
DNA (483bp) protein (161aa)
SnoaL-like polyketide cyclase n=1 Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RIC6_MYCRN
SnoaL-like polyketide cyclase
SnoaL-like polyketide cyclase {ECO:0000313|EMBL:AEV74641.1}; TaxID=710685 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae (strain NBB3).;"
SCNpilot_expt_300_bf_scaffold_1563_curated_15
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17239..18360)
DNA (1122bp) protein (374aa)
Beta-1,4-xylanase n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5X556_MYCNE
beta-1,4-xylanase
Beta-1,4-xylanase {ECO:0000313|EMBL:AHC23565.1}; TaxID=700508 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum VKM Ac-1815D.;"
SCNpilot_expt_300_bf_scaffold_1563_curated_16
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18391..18858)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RJL8_BLASD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG02323.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
SCNpilot_expt_300_bf_scaffold_1563_curated_17
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18861..20003)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z4Z3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM65765.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1563_curated_18
unknown

Not on your lists

comp(20058..20165)
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1563_curated_19
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20502..21365)
DNA (864bp) protein (288aa)
Pirin domain protein n=1 Tax=Frankia sp. CN3 RepID=G6HLC3_9ACTO
MarR family transcriptional regulator {ECO:0000313|EMBL:KDS84004.1}; TaxID=1906 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;"
pirin; K06911
SCNpilot_expt_300_bf_scaffold_1563_curated_20
Amycolicicoccus subflavus, Amycolicicoccus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21420..22022)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) RepID=F6EQB0_AMYSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF40595.1}; TaxID=443218 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Amycolicicoccus.;" source="Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1).;"
SCNpilot_expt_300_bf_scaffold_1563_curated_21
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22086..22781)
DNA (696bp) protein (232aa)
Nitroreductase n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4I3Y0_MYCRH
Nitroreductase {ECO:0000313|EMBL:EHB50367.1}; TaxID=931627 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae JS60.;"
nitroreductase
SCNpilot_expt_300_bf_scaffold_1563_curated_22
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22784..22945)
DNA (162bp) protein (54aa)
Glyoxalase family protein n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UVD3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:AIY15931.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
hypothetical protein
Displaying 22 items

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