name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_300_bf_scaffold_140_curated_1
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
73..888
|
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGJ8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU61517.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
nidogen, extracellular region
|
|
SCNpilot_expt_300_bf_scaffold_140_curated_2
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria
|
Not on your lists |
1079..1954
|
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PB66_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40475.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
|
|
SCNpilot_expt_300_bf_scaffold_140_curated_3
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2355..2681)
|
transcriptional modulator of MazE/toxin, MazF; K07171 mRNA interferase [EC:3.1.-.-]
Transcriptional modulator of MazE/toxin, MazF n=4 Tax=root RepID=C6BQJ6_RALP1
Transcriptional modulator of MazE/toxin, MazF {ECO:0000313|EMBL:ACS66354.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
|
|
SCNpilot_expt_300_bf_scaffold_140_curated_4
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2678..2935)
|
Transcriptional regulator/antitoxin, MazE n=2 Tax=mine drainage metagenome RepID=T1BK95_9ZZZZ
Antitoxin PemI {ECO:0000313|EMBL:CDQ09102.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
transcriptional regulator/antitoxin, MazE; K07172 antitoxin
|
|
SCNpilot_expt_300_bf_scaffold_140_curated_5
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(3280..3450)
|
Uncharacterized protein n=3 Tax=Elizabethkingia RepID=L8K1Q5_9FLAO
Glyoxalase {ECO:0000313|EMBL:KFC37989.1}; TaxID=238 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica (Chryseobacterium meningosepticum).;"
|
|
SCNpilot_expt_300_bf_scaffold_140_curated_6
Microcystis sp. T1-4, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria
|
Not on your lists |
comp(3845..4144)
|
Virulence-associated protein A n=1 Tax=Microcystis sp. T1-4 RepID=I4IEH6_9CHRO
Virulence-associated protein A {ECO:0000313|EMBL:CCI32700.1}; TaxID=1160279 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis sp. T1-4.;"
HTH-type transcriptional regulator
|
|
SCNpilot_expt_300_bf_scaffold_140_curated_7
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4665..5615)
|
peptidase S49; K04773 protease IV [EC:3.4.21.-]
Periplasmic serine proteases (ClpP class) n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIP9_9PROT
Peptidase S49 {ECO:0000313|EMBL:KIO49808.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
|
|
SCNpilot_expt_300_bf_scaffold_140_curated_8
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5731..6708)
|
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028, ECO:0000313|EMBL:KIO50088.1}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
pseudouridine synthase RluD; K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Pseudouridine synthase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DID4_9PROT
|
|
SCNpilot_expt_300_bf_scaffold_140_curated_9
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7169..10012
|
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
ribonuclease; K08300 ribonuclease E [EC:3.1.26.12]
Ribonuclease E n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGG2_9PROT
|
|
SCNpilot_expt_300_bf_scaffold_140_curated_10
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10207..10734)
|
Low molecular weight protein tyrosine phosphatase {ECO:0000313|EMBL:CCU62330.1}; EC=3.1.3.48 {ECO:0000313|EMBL:CCU62330.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
protein tyrosine phosphatase; K01104 protein-tyrosine phosphatase [EC:3.1.3.48]
Low molecular weight protein tyrosine phosphatase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DSG7_9PROT
|
|
SCNpilot_expt_300_bf_scaffold_140_curated_11
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10741..12117)
|
Phosphoglucomutase {ECO:0000313|EMBL:KIO49814.1}; EC=5.4.2.2 {ECO:0000313|EMBL:KIO49814.1};; EC=5.4.2.8 {ECO:0000313|EMBL:KIO49814.1};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
phosphomannomutase (EC:5.4.2.8); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
Phosphomannomutase / Phosphoglucomutase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIP5_9PROT
|
|
SCNpilot_expt_300_bf_scaffold_140_curated_12
unknown
|
Not on your lists |
12124..12504
|
This feature has no annotations |
|
SCNpilot_expt_300_bf_scaffold_140_curated_13
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12385..12627)
|
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DID1_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62327.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_140_curated_14
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12631..13551)
|
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:KIO49815.1}; EC=2.6.1.42 {ECO:0000313|EMBL:KIO49815.1};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
branched-chain amino acid aminotransferase (EC:2.6.1.42); K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42]
Branched-chain amino acid aminotransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGF8_9PROT
|
|
SCNpilot_expt_300_bf_scaffold_140_curated_15
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13690..16449)
|
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-synthase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; [Glutamate--ammonia-ligase] adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase (EC:2.7.7.42); K00982 glutamate-ammonia-ligase adenylyltransferase [EC:2.7.7.42]
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DI86_9PROT
|
|
SCNpilot_expt_300_bf_scaffold_140_curated_16
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16664..20554
|
FIG005080: Possible exported protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIP4_9PROT
FIG005080: Possible exported protein {ECO:0000313|EMBL:CCU62323.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_140_curated_17
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20912..21769
|
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; K01501 nitrilase [EC:3.5.5.1]
FIG003879: Predicted amidohydrolase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIC8_9PROT
Acyltransferase {ECO:0000313|EMBL:KIO49816.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
|
|
SCNpilot_expt_300_bf_scaffold_140_curated_18
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21795..23255
|
TldD protein, part of proposed TldE/TldD proteolytic complex n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGF5_9PROT
TldD protein, part of proposed TldE/TldD proteolytic complex {ECO:0000313|EMBL:CCU62321.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
peptidase U62, modulator of DNA gyrase; K03568 TldD protein
|
|
SCNpilot_expt_300_bf_scaffold_140_curated_19
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23309..23755)
|
Probable transmembrane protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DSF6_9PROT
Membrane protein {ECO:0000313|EMBL:KIO49818.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
RDD
|
|
SCNpilot_expt_300_bf_scaffold_140_curated_20
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23811..24203)
|
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DI84_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62319.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_140_curated_21
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24185..24547)
|
Probable transmembrane protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIP0_9PROT
Probable transmembrane protein {ECO:0000313|EMBL:CCU62318.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_140_curated_22
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24544..25173)
|
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABF5_9PROT
RNA polymerase subunit sigma-70 {ECO:0000313|EMBL:KIO50091.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
|
|
SCNpilot_expt_300_bf_scaffold_140_curated_23
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25646..26197
|
Signal peptide protein {ECO:0000313|EMBL:KIO50092.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
signal peptide protein
|
|
SCNpilot_expt_300_bf_scaffold_140_curated_24
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26202..26852
|
Ferric siderophore transport system, periplasmic binding protein TonB n=1 Tax=Nitrosospira sp. APG3 RepID=M5DSF2_9PROT
Ferric siderophore transport system, periplasmic binding protein TonB {ECO:0000313|EMBL:CCU62315.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
TonB-like protein; K03832 periplasmic protein TonB
|
|
SCNpilot_expt_300_bf_scaffold_140_curated_25
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26857..27606
|
MotA/TolQ/ExbB proton channel family protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DI80_9PROT
MotA/TolQ/ExbB proton channel family protein {ECO:0000313|EMBL:CCU62314.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
MotA/TolQ/ExbB proton channel; K03561 biopolymer transport protein ExbB
|
|
SCNpilot_expt_300_bf_scaffold_140_curated_26
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27606..28028
|
Biopolymer transport protein ExbD/TolR n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIN7_9PROT
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:CCU62313.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD
|
|
SCNpilot_expt_300_bf_scaffold_140_curated_27
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28176..28697
|
Fe2+-dicitrate sensor membrane component-like n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIC2_9PROT
Fe2+-dicitrate sensor membrane component-like protein {ECO:0000313|EMBL:KIO49824.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Fe2+-dicitrate sensor membrane component-like protein
|
|
SCNpilot_expt_300_bf_scaffold_140_curated_28
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29235..30014
|
Glutamine amidotransferase class-I n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YA73_NITMU
Glutamine amidotransferase {ECO:0000313|EMBL:KIO49825.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
glutamine amidotransferase class-I
|
|
SCNpilot_expt_300_bf_scaffold_140_curated_29
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30122..30607)
|
UPF0234 protein EBAPG3_13420 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DI78_9PROT
UPF0234 protein EBAPG3_13420 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
putative nucleotide-binding protein; K09767 hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_140_curated_30
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30672..31922)
|
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Argininosuccinate synthase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=ASSY_NITMU
rbh
|