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SCNpilot_expt_500_bf_scaffold_744

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_744_1
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..2857)
DNA (2856bp) protein (952aa)
Conjugative transfer ATPase, PFL_4706 family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G755_ALIDK rbh
Conjugative transfer ATPase, PFL_4706 family {ECO:0000313|EMBL:AEB84299.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
conjugative transfer ATPase rbh
SCNpilot_expt_500_bf_scaffold_744_2
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2857..3297)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BE23_RALP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS61983.1}; Flags: Precursor;; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
SCNpilot_expt_500_bf_scaffold_744_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3278..4600)
DNA (1323bp) protein (441aa)
Integrating conjugative element protein, PFL_4705 family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G753_ALIDK
integrating conjugative element protein
Integrating conjugative element protein, PFL_4705 family {ECO:0000313|EMBL:AEB84297.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_500_bf_scaffold_744_4
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4678..5598)
DNA (921bp) protein (307aa)
Integrating conjugative element protein, PFL_4704 family n=1 Tax=Burkholderia multivorans ATCC BAA-247 RepID=J5CJN3_9BURK
Integrating conjugative element protein {ECO:0000313|EMBL:GAO21715.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_744_5
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5595..6287)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BE20_RALP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS61980.1}; Flags: Precursor;; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
SCNpilot_expt_500_bf_scaffold_744_6
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6284..6733)
DNA (450bp) protein (150aa)
Conjugal transfer protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QKP1_RALPI
Conjugal transfer protein {ECO:0000313|EMBL:AGW91600.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_744_7
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6746..7114)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P5D8_AROAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI07474.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
SCNpilot_expt_500_bf_scaffold_744_8
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7140..7379)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SIF3_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM95342.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
SCNpilot_expt_500_bf_scaffold_744_9
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7376..7762)
DNA (387bp) protein (129aa)
Integrative conjugative element protein, RAQPRD family n=1 Tax=Burkholderia multivorans ATCC BAA-247 RepID=J5CQ84_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS61976.1}; Flags: Precursor;; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
SCNpilot_expt_500_bf_scaffold_744_10
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7859..8467)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BE15_RALP1
hypothetical protein
Integrating conjugative element membrane protein {ECO:0000313|EMBL:GAO21707.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_500_bf_scaffold_744_11
Thauera aminoaromatica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8532..10691)
DNA (2160bp) protein (720aa)
Conjugative coupling factor TraD n=1 Tax=Pseudomonas aeruginosa PA45 RepID=N4WAR5_PSEAI
Conjugative coupling factor TraD {ECO:0000313|EMBL:ENO89005.1}; TaxID=1234381 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera aminoaromatica S2.;"
conjugative coupling factor TraD
SCNpilot_expt_500_bf_scaffold_744_12
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10710..11276)
DNA (567bp) protein (189aa)
Integrating conjugative element protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QKQ8_RALPI
Integrating conjugative element protein {ECO:0000313|EMBL:GAO21705.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_744_13
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11273..11860)
DNA (588bp) protein (196aa)
Uncharacterized protein n=4 Tax=Proteobacteria RepID=S2WZ64_DELAC
Soluble lytic murein transglycosylase {ECO:0000313|EMBL:GAO21704.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
lytic transglycosylase catalytic subunit
SCNpilot_expt_500_bf_scaffold_744_14
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11845..12585)
DNA (741bp) protein (247aa)
Putative secreted protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BE11_RALP1 rbh
Putative exported protein {ECO:0000313|EMBL:GAO21703.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_744_15
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12595..13230)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa PA45 RepID=N4VX63_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE97671.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
SCNpilot_expt_500_bf_scaffold_744_16
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13227..13820)
DNA (594bp) protein (198aa)
Integrating conjugative element protein PilL n=1 Tax=Pseudomonas aeruginosa PA45 RepID=N4WAR9_PSEAI
Integrating conjugative element protein PilL {ECO:0000313|EMBL:GAO21701.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein; K02487 type IV pili sensor histidine kinase and response regulator
SCNpilot_expt_500_bf_scaffold_744_17
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14036..15406)
DNA (1371bp) protein (457aa)
Putative RNA-directed DNA polymerase n=1 Tax=Variovorax paradoxus B4 RepID=T1XCU8_VARPD rbh
putative RNA-directed DNA polymerase rbh
Putative RNA-directed DNA polymerase {ECO:0000313|EMBL:AGU50311.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_expt_500_bf_scaffold_744_18
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15848..18127)
DNA (2280bp) protein (760aa)
DEAD-like helicase n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BE08_RALP1 rbh
DEAD-like helicase {ECO:0000313|EMBL:ACS61968.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
DEAD/DEAH box helicase rbh
SCNpilot_expt_500_bf_scaffold_744_19
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18228..18533)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6H3_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB84282.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_500_bf_scaffold_744_20
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18635..19744)
DNA (1110bp) protein (370aa)
Conserved hypothetical plasmid protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P5C0_AROAE
hypothetical protein
Conserved hypothetical plasmid protein {ECO:0000313|EMBL:CAI07492.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
SCNpilot_expt_500_bf_scaffold_744_21
Thauera aminoaromatica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19812..20480)
DNA (669bp) protein (223aa)
Uncharacterized protein n=5 Tax=Proteobacteria RepID=F4G6H1_ALIDK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ENO88997.1}; TaxID=1234381 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera aminoaromatica S2.;"
SCNpilot_expt_500_bf_scaffold_744_22
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20797..20970)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GNL7_THISH
F plasmid protein 32-like protein {ECO:0000313|EMBL:GAO21689.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_744_23
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20982..21221)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=T0B0F2_9RHOO
F plasmid protein 32-like protein {ECO:0000313|EMBL:GAO21689.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_744_24
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21311..21916)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZS08_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:GAO21688.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_744_25
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22024..22581)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G4U6_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB84141.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_500_bf_scaffold_744_26
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22854..24158)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6G5_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB84274.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_500_bf_scaffold_744_27
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24299..24664)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri B1SMN1 RepID=S6JMI0_PSEST
Uncharacterized protein {ECO:0000313|EMBL:EPL60979.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_744_28
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24730..25527)
DNA (798bp) protein (266aa)
Uncharacterized protein n=6 Tax=Proteobacteria RepID=K1D0K0_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:GAO21686.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_744_29
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26035..26298
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2G907_BURVI
Uncharacterized protein {ECO:0000313|EMBL:ERJ39817.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia sp. AU4i.;"
putative Thioredoxin/glutaredoxin
SCNpilot_expt_500_bf_scaffold_744_30
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26298..26720
DNA (423bp) protein (141aa)
Transcriptional regulator, MerR family n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2HNN3_BURVI
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ERJ39818.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia sp. AU4i.;"
putative MerR family regulatory protein
Displaying items 1-30 of 73 in total

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