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SCNpilot_expt_500_bf_scaffold_918

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_918_1
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..764
DNA (762bp) protein (254aa)
mucin n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000371E495
Alpha-helical coiled-coil filamentous protein {ECO:0000313|EMBL:GAD21764.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_918_2
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1084..1497)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J3DCL0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL89219.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_918_3
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1506..3092)
DNA (1587bp) protein (529aa)
TraD protein n=1 Tax=Thauera sp. 28 RepID=N6YHK1_9RHOO rbh
trwB; Type IV secretion system protein
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_expt_500_bf_scaffold_918_4
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3209..3826)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Burkholderia phenoliruptrix BR3459a RepID=K0DS26_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KEA55904.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_918_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3807..4508)
DNA (702bp) protein (234aa)
MobD mobilisation protein n=1 Tax=Pseudomonas aeruginosa RepID=Q4W1T1_PSEAI
MobD mobilisation protein {ECO:0000313|EMBL:CAI46965.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
MobD
SCNpilot_expt_500_bf_scaffold_918_6
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4538..4933)
DNA (396bp) protein (132aa)
Protein MobC n=1 Tax=Acidithiobacillus ferrooxidans RepID=MOBC_ACIFR
Protein MobC; TaxID=920 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (Thiobacillus ferrooxidans).;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_918_7
Laribacter hongkongensis, Laribacter, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5234..5536
DNA (303bp) protein (101aa)
Putative MobB protein n=1 Tax=Laribacter hongkongensis RepID=B0YN43_9NEIS
Putative MobB protein {ECO:0000313|EMBL:ABV90274.1}; TaxID=168471 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Laribacter.;" source="Laribacter hongkongensis.;"
MobB mobilization protein
SCNpilot_expt_500_bf_scaffold_918_8
Xanthomonas fuscans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5536..7443
DNA (1908bp) protein (636aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535 RepID=D4TBW4_9XANT rbh
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EFF45808.1}; TaxID=427082 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535.;"
mobA; mobilization protein MobA rbh
SCNpilot_expt_500_bf_scaffold_918_9
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7455..8342
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Thauera sp. 28 RepID=N6Y9G8_9RHOO
Microtubule/TRAF3 and DISC1 binding protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_expt_500_bf_scaffold_918_10
R_Proteobacteria_53_8, Proteobacteria, Bacteria

Not on your lists

8407..8898
DNA (492bp) protein (164aa)
Tax=RIFCSPLOWO2_02_FULL_Proteobacteria_53_8_curated
SCNpilot_expt_500_bf_scaffold_918_11
unknown

Not on your lists

8895..9233
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_918_12
Photorhabdus temperata, Photorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9387..9875
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002378555
Uncharacterized protein {ECO:0000313|EMBL:ETS32011.1}; TaxID=1004151 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Photorhabdus.;" source="Photorhabdus temperata subsp. khanii NC19.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_918_13
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9821..10147
DNA (327bp) protein (109aa)
Addiction module toxin, RelE/StbE family n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AVI4_DELSC
RelE/StbE family addiction module toxin
Addiction module toxin, RelE/StbE family {ECO:0000313|EMBL:AEF92073.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
SCNpilot_expt_500_bf_scaffold_918_14
unknown

Not on your lists

10279..10551
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_918_15
unknown

Not on your lists

10729..11538
DNA (810bp) protein (270aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_918_16
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11620..12684
DNA (1065bp) protein (355aa)
Plasmid replication initiator protein n=1 Tax=Thauera sp. 27 RepID=N6XAB8_9RHOO rbh
Plasmid replication initiator protein {ECO:0000313|EMBL:ENO76270.1}; TaxID=305700 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
plasmid replication initiator protein-like rbh
SCNpilot_expt_500_bf_scaffold_918_17
R_Gallionellales_60_31, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12681..13166
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SG29_GALCS
hypothetical protein
Tax=RIFCSPLOWO2_02_Gallionellales_60_31_curated
SCNpilot_expt_500_bf_scaffold_918_18
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14094..14375
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=2 Tax=Thiomonas RepID=D5X0B2_THIK1
putative Methionine repressor-like
Putative Methionine repressor-like {ECO:0000313|EMBL:CDW95318.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
SCNpilot_expt_500_bf_scaffold_918_19
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14372..14869
DNA (498bp) protein (166aa)
GCN5-related N-acetyltransferase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X0B1_THIK1 rbh
N-acetyltransferase GCN5 rbh
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADG30557.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
SCNpilot_expt_500_bf_scaffold_918_20

Not on your lists

comp(15123..15608)
DNA (486bp) protein (162aa)
Regulator with HTH domain protein n=1 Tax=mine drainage metagenome RepID=T0Y8J9_9ZZZZ
Regulator with HTH domain protein {ECO:0000313|EMBL:EQD29473.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
Displaying 20 items

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