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SCNpilot_expt_500_bf_scaffold_1068

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1068_1
Habrotrocha constricta, Habrotrocha, Philodinida, Bdelloidea, Rotifera, Metazoa

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comp(3..152)
DNA (150bp) protein (50aa)
NADH-ubiquinone oxidoreductase chain 3 {ECO:0000256|RuleBase:RU003640}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU003640};; TaxID=104786 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Philodinida; Habrotrochidae; Habrotrocha.;" source="Habrotrocha constricta (Rotifer).;"
NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Habrotrocha constricta RepID=J7KCR0_HABCO
SCNpilot_expt_500_bf_scaffold_1068_2
Adineta vaga, Adineta, Adinetida, Bdelloidea, Rotifera, Metazoa

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comp(152..916)
DNA (765bp) protein (255aa)
Cytochrome c oxidase subunit 3 (Fragment) n=1 Tax=Adineta vaga RepID=J7KEE7_ADIVA rbh
Cytochrome c oxidase subunit 3 {ECO:0000256|RuleBase:RU003375}; Flags: Fragment;; TaxID=104782 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Adinetida; Adinetidae; Adineta.;" source="Adineta vaga (Rotifer) (Callidina vaga).;"
cytochrome c oxidase subunit III
SCNpilot_expt_500_bf_scaffold_1068_3
Adineta vaga, Adineta, Adinetida, Bdelloidea, Rotifera, Metazoa

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comp(964..1617)
DNA (654bp) protein (218aa)
Cytochrome c oxidase subunit 2 n=1 Tax=Adineta vaga RepID=J7KCM5_ADIVA rbh
Cytochrome c oxidase subunit 2 {ECO:0000256|RuleBase:RU000457}; TaxID=104782 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Adinetida; Adinetidae; Adineta.;" source="Adineta vaga (Rotifer) (Callidina vaga).;"
cytochrome c oxidase subunit II; K02261 cytochrome c oxidase subunit 2
SCNpilot_expt_500_bf_scaffold_1068_4
Habrotrocha constricta, Habrotrocha, Philodinida, Bdelloidea, Rotifera, Metazoa

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comp(2342..3877)
DNA (1536bp) protein (512aa)
NADH dehydrogenase subunit 5 (Fragment) n=1 Tax=Habrotrocha constricta RepID=J7KL80_HABCO rbh
NADH dehydrogenase subunit 5 {ECO:0000313|EMBL:AFQ97019.1}; Flags: Fragment;; TaxID=104786 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Philodinida; Habrotrochidae; Habrotrocha.;" source="Habrotrocha constricta (Rotifer).;"
ND5; NADH dehydrogenase subunit 5
SCNpilot_expt_500_bf_scaffold_1068_5
Habrotrocha constricta, Habrotrocha, Philodinida, Bdelloidea, Rotifera, Metazoa

Not on your lists

comp(3921..5048)
DNA (1128bp) protein (376aa)
NADH-ubiquinone oxidoreductase chain 4 {ECO:0000256|RuleBase:RU003297}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU003297};; Flags: Fragment;; TaxID=104786 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Philodinida; Habrotrochidae; Habrotrocha.;" source="Habrotrocha constricta (Rotifer).;"
ND4; NADH dehydrogenase subunit 4; K03881 NADH-ubiquinone oxidoreductase chain 4 [EC:1.6.5.3]
NADH-ubiquinone oxidoreductase chain 4 (Fragment) n=1 Tax=Habrotrocha constricta RepID=J7KEI0_HABCO rbh
SCNpilot_expt_500_bf_scaffold_1068_6
Habrotrocha constricta, Habrotrocha, Philodinida, Bdelloidea, Rotifera, Metazoa

Not on your lists

comp(5090..5362)
DNA (273bp) protein (91aa)
NADH dehydrogenase subunit 4L n=1 Tax=Habrotrocha constricta RepID=J7KK14_HABCO
NADH dehydrogenase subunit 4L {ECO:0000313|EMBL:AFQ97011.1}; TaxID=104786 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Philodinida; Habrotrochidae; Habrotrocha.;" source="Habrotrocha constricta (Rotifer).;"
SCNpilot_expt_500_bf_scaffold_1068_7
Habrotrocha constricta, Habrotrocha, Philodinida, Bdelloidea, Rotifera, Metazoa

Not on your lists

comp(5404..6489)
DNA (1086bp) protein (362aa)
Cytochrome b n=1 Tax=Habrotrocha constricta RepID=J7KHX2_HABCO rbh
Cytochrome b {ECO:0000256|RuleBase:RU000300}; TaxID=104786 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Philodinida; Habrotrochidae; Habrotrocha.;" source="Habrotrocha constricta (Rotifer).;"
CYTB; cytochrome b
SCNpilot_expt_500_bf_scaffold_1068_8
Adineta vaga, Adineta, Adinetida, Bdelloidea, Rotifera, Metazoa

Not on your lists

comp(6489..7328)
DNA (840bp) protein (280aa)
NADH-ubiquinone oxidoreductase chain 1 {ECO:0000256|RuleBase:RU000473}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU000473};; Flags: Fragment;; TaxID=104782 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Adinetida; Adinetidae; Adineta.;" source="Adineta vaga (Rotifer) (Callidina vaga).;"
NADH dehydrogenase subunit 1; K03878 NADH-ubiquinone oxidoreductase chain 1 [EC:1.6.5.3]
NADH-ubiquinone oxidoreductase chain 1 (Fragment) n=1 Tax=Adineta vaga RepID=J7KL38_ADIVA rbh
SCNpilot_expt_500_bf_scaffold_1068_9
Adineta vaga, Adineta, Adinetida, Bdelloidea, Rotifera, Metazoa

Not on your lists

comp(7577..8035)
DNA (459bp) protein (153aa)
F0F1 ATP synthase subunit A (EC:3.6.3.14); K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14]
ATP synthase F0 subunit 6 (Fragment) n=1 Tax=Adineta vaga RepID=J7KKZ1_ADIVA
ATP synthase F0 subunit 6 {ECO:0000313|EMBL:AFQ96939.1}; Flags: Fragment;; TaxID=104782 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Adinetida; Adinetidae; Adineta.;" source="Adineta vaga (Rotifer) (Callidina vaga).;"
SCNpilot_expt_500_bf_scaffold_1068_10
Habrotrocha constricta, Habrotrocha, Philodinida, Bdelloidea, Rotifera, Metazoa

Not on your lists

comp(8433..8822)
DNA (390bp) protein (130aa)
NADH dehydrogenase subunit 6 n=1 Tax=Habrotrocha constricta RepID=J7KI32_HABCO
NADH dehydrogenase subunit 6 {ECO:0000313|EMBL:AFQ97027.1}; TaxID=104786 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Philodinida; Habrotrochidae; Habrotrocha.;" source="Habrotrocha constricta (Rotifer).;"
SCNpilot_expt_500_bf_scaffold_1068_11
Adineta vaga, Adineta, Adinetida, Bdelloidea, Rotifera, Metazoa

Not on your lists

comp(9742..11280)
DNA (1539bp) protein (513aa)
Cytochrome c oxidase subunit 1 {ECO:0000256|RuleBase:RU000369}; EC=1.9.3.1 {ECO:0000256|RuleBase:RU000369};; Flags: Fragment;; TaxID=104782 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Adinetida; Adinetidae; Adineta.;" source="Adineta vaga (Rotifer) (Callidina vaga).;"
Cytochrome c oxidase subunit 1 (Fragment) n=8 Tax=Adineta vaga RepID=J7KHU3_ADIVA rbh
COX1; cytochrome c oxidase subunit I rbh
SCNpilot_expt_500_bf_scaffold_1068_12
Macrotrachela quadricornifera, Macrotrachela, Philodinida, Bdelloidea, Rotifera, Metazoa

Not on your lists

comp(11255..12118)
DNA (864bp) protein (288aa)
NADH dehydrogenase subunit 2 (Fragment) n=1 Tax=Macrotrachela quadricornifera RepID=J7KL48_9BILA rbh
NADH dehydrogenase subunit 2 {ECO:0000313|EMBL:AFQ96989.1}; Flags: Fragment;; TaxID=104788 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Philodinida; Philodinidae; Macrotrachela.;" source="Macrotrachela quadricornifera.;"
SCNpilot_expt_500_bf_scaffold_1068_13
unknown

Not on your lists

comp(12240..12362)
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1068_14
unknown

Not on your lists

14094..14276
DNA (183bp) protein (61aa)

This feature has no annotations

Displaying 14 items

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