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SCNpilot_expt_500_bf_scaffold_1383

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1383_1
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..486
DNA (486bp) protein (162aa)
Vitamin K epoxide reductase n=2 Tax=Microbacterium RepID=H8E9V3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ52865.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1383_2
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

592..1476
DNA (885bp) protein (295aa)
Cobyrinic acid ac-diamide synthase n=2 Tax=Microbacterium RepID=H8E9V0_9MICO rbh
Chromosome partitioning protein {ECO:0000313|EMBL:EPD83648.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
parA; ATPase; K03496 chromosome partitioning protein
SCNpilot_expt_500_bf_scaffold_1383_3
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1460..2353
DNA (894bp) protein (298aa)
Chromosome segregation and condensation protein ScpA n=2 Tax=Microbacterium RepID=H8E9U9_9MICO rbh
Chromosome segregation protein ScpA {ECO:0000313|EMBL:KIC56934.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein; K05896 segregation and condensation protein A
SCNpilot_expt_500_bf_scaffold_1383_4
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2343..2969
DNA (627bp) protein (209aa)
Segregation and condensation protein B n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9U8_9MICO rbh
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
transcriptional regulator containing the HTH domain; K06024 segregation and condensation protein B
SCNpilot_expt_500_bf_scaffold_1383_5
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2966..3769
DNA (804bp) protein (268aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
rsuA; 16S rRNA uridine-516 pseudouridylate synthase; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Pseudouridine synthase n=2 Tax=Microbacterium RepID=H8E9U7_9MICO
SCNpilot_expt_500_bf_scaffold_1383_6
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3779..4810
DNA (1032bp) protein (344aa)
tyrA; prephenate dehydrogenase; K04517 prephenate dehydrogenase [EC:1.3.1.12]
Prephenate dehydrogenase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XSH7_9MICO
Prephenate dehydrogenase {ECO:0000313|EMBL:GAD35797.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
SCNpilot_expt_500_bf_scaffold_1383_7
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4807..5517
DNA (711bp) protein (237aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
cmk; cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14]
cytidylate kinase n=1 Tax=Microbacterium sp. 11MF RepID=UPI00036104F5 rbh
SCNpilot_expt_500_bf_scaffold_1383_8
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5507..7030
DNA (1524bp) protein (508aa)
GTPase Der n=2 Tax=Microbacterium RepID=H8E9U4_9MICO rbh
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
engA; GTPase; K03977 GTP-binding protein
SCNpilot_expt_500_bf_scaffold_1383_9
BJP_IG2157_Actinomycetales_63_19, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

7128..9611
DNA (2484bp) protein (828aa)
Coenzyme A disulfide reductase n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6WEH2_9ACTO rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase rbh
Tax=BJP_IG2157_Actinomycetales_63_19
SCNpilot_expt_500_bf_scaffold_1383_10
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10132..10872)
DNA (741bp) protein (247aa)
anaerobic ribonucleoside-triphosphate reductase activating protein; K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4]
Anaerobic ribonucleoside-triphosphate reductase activating protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AAM7_9MICO rbh
Anaerobic ribonucleoside-triphosphate reductase activating protein {ECO:0000313|EMBL:EPD83640.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
SCNpilot_expt_500_bf_scaffold_1383_11
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10842..12674)
DNA (1833bp) protein (611aa)
anaerobic ribonucleoside-triphosphate reductase; K00527 ribonucleoside-triphosphate reductase [EC:1.17.4.2]
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9U2_9MICO rbh
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EIC06305.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
SCNpilot_expt_500_bf_scaffold_1383_12
unknown

Not on your lists

comp(12798..13004)
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1383_13
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13169..13705
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A3I5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD83638.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
NTP pyrophosphohydrolase including oxidative damage repair enzyme
SCNpilot_expt_500_bf_scaffold_1383_14
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13702..14289
DNA (588bp) protein (196aa)
GDP-D-mannose dehydratase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XSH1_9MICO
GDP-D-mannose dehydratase {ECO:0000313|EMBL:GAD35792.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1383_15
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14298..14660)
DNA (363bp) protein (121aa)
Hsp15-like protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AN99_9MICO
tRNA synthetase RNA-binding protein {ECO:0000313|EMBL:KIC56943.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
ribosome-associated heat shock protein implicated in the recycling of the 50S subunit; K04762 ribosome-associated heat shock protein Hsp15
SCNpilot_expt_500_bf_scaffold_1383_16
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14657..15172)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XA24_MYCNE
Appr-1-p processing domain-containing protein {ECO:0000313|EMBL:CDO20653.1}; TaxID=53462 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
appr-1-p processing domain-containing protein
SCNpilot_expt_500_bf_scaffold_1383_17
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15174..15752)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A4M7_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD83636.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1383_18
unknown

Not on your lists

16046..16465
DNA (420bp) protein (140aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1383_19
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16772..16966
DNA (195bp) protein (65aa)
Bifunctional ligase/repressor BirA {ECO:0000313|EMBL:KJL31465.1}; EC=6.3.4.15 {ECO:0000313|EMBL:KJL31465.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
transcriptional regulator n=1 Tax=Agromyces italicus RepID=UPI0003B5D9B7
DeoR family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_1383_20
Gordonia paraffinivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17001..18455)
DNA (1455bp) protein (485aa)
Uncharacterized protein n=1 Tax=Gordonia paraffinivorans NBRC 108238 RepID=M3VGA3_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:GAC85798.1}; TaxID=1223543 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia paraffinivorans NBRC 108238.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_1383_21
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18496..19101)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B4X5_9MICO
Cyanamide hydratase {ECO:0000313|EMBL:KIC56961.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1383_22
Mesorhizobium sp. UASWS1009, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19203..19832)
DNA (630bp) protein (210aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; O-6-methylguanine-DNA-alkyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; TaxID=1566387 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. UASWS1009.;"
O-6-methylguanine DNA methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
hypothetical protein n=1 Tax=Brevibacterium sp. JC43 RepID=UPI0002DE9A00
SCNpilot_expt_500_bf_scaffold_1383_23
Kytococcus sedentarius, Kytococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19832..20359)
DNA (528bp) protein (176aa)
RNA polymerase sigma24 factor n=1 Tax=Glaciibacter superstes RepID=UPI0003B5A0DE
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ACV05708.1}; TaxID=478801 species="Bacteria; Actinobacteria; Micrococcales; Dermacoccaceae; Kytococcus.;" source="Kytococcus sedentarius (strain ATCC 14392 / DSM 20547 / CCM 314 / 541); (Micrococcus sedentarius).;"
SCNpilot_expt_500_bf_scaffold_1383_24
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20417..21799)
DNA (1383bp) protein (461aa)
membrane protein n=1 Tax=Agromyces subbeticus RepID=UPI0003B34E43 rbh
Uncharacterized protein {ECO:0000313|EMBL:KDA05236.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_1383_25
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22068..23768
DNA (1701bp) protein (567aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003603FB6 rbh
Sulfate transporter {ECO:0000313|EMBL:KHK96606.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
putative sulfate transporter rbh
SCNpilot_expt_500_bf_scaffold_1383_26
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23869..24756
DNA (888bp) protein (296aa)
Putative oxidoreductase YghA {ECO:0000313|EMBL:KJL20527.1}; EC=1.-.-.- {ECO:0000313|EMBL:KJL20527.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
short-chain dehydrogenase/reductase SDR; K00540 [EC:1.-.-.-]
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003698128 rbh
SCNpilot_expt_500_bf_scaffold_1383_27
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24764..25192)
DNA (429bp) protein (143aa)
NrdI protein n=2 Tax=Microbacterium RepID=S3A4K7_9MICO
Putative NrdI-like protein {ECO:0000313|EMBL:KJL37110.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
NrdI protein; K03647 protein involved in ribonucleotide reduction
SCNpilot_expt_500_bf_scaffold_1383_28
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25250..26563)
DNA (1314bp) protein (438aa)
amine oxidase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000366C726 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDK01626.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
monoamine oxidase
SCNpilot_expt_500_bf_scaffold_1383_29
Rhodococcus triatomae, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26627..27547)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003158340
Secretory lipase {ECO:0000313|EMBL:EME17581.1}; TaxID=1278078 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus triatomae BKS 15-14.;"
secretory lipase
SCNpilot_expt_500_bf_scaffold_1383_30
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27526..27816)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003158340
Secretory lipase {ECO:0000313|EMBL:CDK01824.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Displaying items 1-30 of 39 in total

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