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SCNpilot_expt_500_bf_scaffold_1605

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1605_1
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..316)
DNA (315bp) protein (105aa)
Thermonuclease {ECO:0000313|EMBL:EXI82606.1}; EC=3.1.31.1 {ECO:0000313|EMBL:EXI82606.1};; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003707DD3
micrococcal nuclease-like nuclease
SCNpilot_expt_500_bf_scaffold_1605_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(279..863)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036A4F82
integrase family protein
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_500_bf_scaffold_1605_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1078..2184)
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036A4F82
integrase family protein
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_500_bf_scaffold_1605_4
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2239..3504)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=2 Tax=Ralstonia pickettii RepID=B2UKF3_RALPJ rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACD30054.1}; TaxID=402626 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12J).;"
SCNpilot_expt_500_bf_scaffold_1605_5
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3572..4351)
DNA (780bp) protein (260aa)
Gp37Gp68 family protein n=2 Tax=Ralstonia pickettii RepID=B2UKF4_RALPJ rbh
Bacteriophage protein gp37 {ECO:0000313|EMBL:EWS61739.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
Gp37Gp68 family protein rbh
SCNpilot_expt_500_bf_scaffold_1605_6
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4348..4986)
DNA (639bp) protein (213aa)
peptidase S24 and S26 domain protein; K01356 repressor LexA [EC:3.4.21.88]
Peptidase S24 and S26 domain protein n=2 Tax=Ralstonia pickettii RepID=B2UKF5_RALPJ
Peptidase S24 {ECO:0000313|EMBL:AJW46134.1}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytica.;"
SCNpilot_expt_500_bf_scaffold_1605_7
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5092..5943)
DNA (852bp) protein (284aa)
Uncharacterized protein n=2 Tax=Ralstonia pickettii RepID=B2UKF6_RALPJ rbh
Uncharacterized protein {ECO:0000313|EMBL:KGH13004.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_1605_8
Xanthomonas euvesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5997..7187)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Xanthomonas campestris pv. vesicatoria (strain 85-10) RepID=Q3BTL5_XANC5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAJ23844.1}; TaxID=316273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. vesicatoria (strain 85-10).;"
SCNpilot_expt_500_bf_scaffold_1605_9
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7180..9234)
DNA (2055bp) protein (685aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W8W4_ACISJ rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABM42689.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_expt_500_bf_scaffold_1605_10
Buttiauxella agrestis, Buttiauxella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9231..12014)
DNA (2784bp) protein (928aa)
Type II restriction enzyme, methylase subunit {ECO:0000313|EMBL:KFC79766.1}; EC=2.1.1.- {ECO:0000313|EMBL:KFC79766.1};; TaxID=1006004 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Buttiauxella.;" source="Buttiauxella agrestis ATCC 33320.;"
Putative DNA methylase n=1 Tax=Escherichia coli ECC-1470 RepID=V6P5E4_ECOLX rbh
DNA methylase rbh
SCNpilot_expt_500_bf_scaffold_1605_11
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12196..12483)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003777909
Tax=CG_Beta_01
SCNpilot_expt_500_bf_scaffold_1605_12
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12665..13327)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003692264
Uncharacterized protein {ECO:0000313|EMBL:EXI79874.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1605_13
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13329..13526)
DNA (198bp) protein (66aa)
UMUC domain protein DNA-repair protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GIP6_NITSI
UMUC domain-containing protein DNA-repair protein; K03502 DNA polymerase V
UMUC domain protein DNA-repair protein {ECO:0000313|EMBL:AEJ01548.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
Displaying 13 items

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