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SCNpilot_expt_500_bf_scaffold_1934

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1934_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(70..600)
DNA (531bp) protein (177aa)
Uncharacterized protein n=5 Tax=Pseudomonas aeruginosa RepID=G2UBM0_PSEAI rbh
Integrase {ECO:0000313|EMBL:AKE71597.1}; Putative integrase regulator R protein {ECO:0000313|EMBL:BAQ41772.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
putative integrase regulator R protein rbh
SCNpilot_expt_500_bf_scaffold_1934_2
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(597..1382)
DNA (786bp) protein (262aa)
Integrating conjugative element protein n=1 Tax=Pseudomonas aeruginosa X13273 RepID=U8Z1V1_PSEAI rbh
hypothetical protein rbh
Conserved domain protein {ECO:0000313|EMBL:EED40157.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
SCNpilot_expt_500_bf_scaffold_1934_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1700..2944)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=4 Tax=Pseudomonas aeruginosa RepID=G2UBM2_PSEAI rbh
Uncharacterized protein {ECO:0000313|EMBL:BAQ41770.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_1934_4
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2948..3508)
DNA (561bp) protein (187aa)
Coproporphyrinogen III oxidase n=2 Tax=Pseudomonas aeruginosa RepID=U5AXL8_PSEAI rbh
coproporphyrinogen III oxidase rbh
Uncharacterized protein {ECO:0000313|EMBL:CAP44659.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
SCNpilot_expt_500_bf_scaffold_1934_5
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3524..5152)
DNA (1629bp) protein (543aa)
Integrating conjugative element, PFGI_1 class, ParB family protein n=1 Tax=Pseudomonas aeruginosa X13273 RepID=U8YXY0_PSEAI rbh
Uncharacterized protein {ECO:0000313|EMBL:KIZ38132.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
transcriptional regulators rbh
SCNpilot_expt_500_bf_scaffold_1934_6
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5145..5393)
DNA (249bp) protein (83aa)
Cobyrinic acid a,c-diamide synthase n=2 Tax=Pseudomonas aeruginosa RepID=U5AKK8_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP44661.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
SCNpilot_expt_500_bf_scaffold_1934_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5377..6252)
DNA (876bp) protein (292aa)
Cobyrinic acid a,c-diamide synthase n=2 Tax=Pseudomonas aeruginosa RepID=U5ATJ0_PSEAI rbh
cobyrinic acid ac-diamide synthase; K12055 chromosome partitioning related protein ParA rbh
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:ABX36773.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_expt_500_bf_scaffold_1934_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6295..6507)
DNA (213bp) protein (71aa)
Phage transcriptional regulator, AlpA n=5 Tax=Proteobacteria RepID=A9C2W8_DELAS
alpA; phage transcriptional regulator AlpA; K07733 prophage regulatory protein
Phage transcriptional regulator, AlpA {ECO:0000313|EMBL:ABX36772.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_expt_500_bf_scaffold_1934_9
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6626..7381)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa X13273 RepID=U8Z606_PSEAI rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:KIZ38128.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
SCNpilot_expt_500_bf_scaffold_1934_10
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7951..9879)
DNA (1929bp) protein (643aa)
Integrase n=2 Tax=Gammaproteobacteria RepID=G4LMX3_PSEAI rbh
Integrase {ECO:0000313|EMBL:EED37049.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
integrase rbh
Displaying 10 items

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