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SCNpilot_expt_500_bf_scaffold_6043

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_6043_1
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2..1084
DNA (1083bp) protein (361aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
lysS; lysyl-tRNA synthetase (class II); K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Lysine--tRNA ligase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AH41_9MICO
SCNpilot_expt_500_bf_scaffold_6043_2
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1094..1807
DNA (714bp) protein (238aa)
lysine transporter LysE n=1 Tax=Agromyces italicus RepID=UPI0003B7A4C6 rbh
Homoserine/homoserine lactone efflux protein {ECO:0000313|EMBL:KJL17778.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
RHBT family amino acid transporter; K05834 homoserine/homoserine lactone efflux protein
SCNpilot_expt_500_bf_scaffold_6043_3
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1889..3031)
DNA (1143bp) protein (381aa)
Lipopolysaccharide biosynthesis protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5C8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ52470.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
lipopolysaccharide biosynthesis protein
SCNpilot_expt_500_bf_scaffold_6043_4
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3137..3328
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BBP3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC08066.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_6043_5
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3372..4832
DNA (1461bp) protein (487aa)
cls; phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase; K06131 cardiolipin synthase [EC:2.7.8.-]
Cardiolipin synthase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AA89_9MICO
Phospholipase D/Transphosphatidylase {ECO:0000313|EMBL:EIC08065.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
SCNpilot_expt_500_bf_scaffold_6043_6
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5241..5666
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000310FCA9
Uncharacterized protein {ECO:0000313|EMBL:CDK00252.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_6043_7
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6024..6887
DNA (864bp) protein (288aa)
ATP-dependent Clp protease ATP-binding subunit ClpC n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AA82_9MICO
ATPase AAA-2 domain protein {ECO:0000313|EMBL:EIC08062.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
clpC; ATPase with chaperone activity, ATP-binding subunit; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC
Displaying 7 items

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