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SCNpilot_expt_500_bf_scaffold_6132

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_6132_1
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..229)
DNA (228bp) protein (76aa)
ABC transporter n=1 Tax=Humibacter albus RepID=UPI0003B32A5E
ABC transporter {ECO:0000313|EMBL:KHK95513.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
ABC transporter; K09686 antibiotic transport system permease protein
SCNpilot_expt_500_bf_scaffold_6132_2
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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260..913
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L488_9MICO
putative TetR family transcriptional regulator
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_500_bf_scaffold_6132_3
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1117..1521
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A5Y2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84518.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_6132_4
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1625..2032
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002DA0A87
Uncharacterized protein {ECO:0000313|EMBL:CDK00021.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_6132_5
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2045..2392
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Agromyces subbeticus RepID=UPI0003B3A5E9
Uncharacterized protein {ECO:0000313|EMBL:CDK00020.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_6132_6
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2429..3826
DNA (1398bp) protein (466aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=S3ACW1_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD84515.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_6132_7
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3902..4327)
DNA (426bp) protein (142aa)
Regulatory protein MerR n=2 Tax=Microbacterium RepID=H8E704_9MICO
Transcriptional regulator {ECO:0000313|EMBL:KIC58771.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
transcriptional regulator; K13640 MerR family transcriptional regulator, heat shock protein HspR
SCNpilot_expt_500_bf_scaffold_6132_8
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4438..5436)
DNA (999bp) protein (333aa)
Chaperone DnaJ domain protein n=2 Tax=Microbacterium RepID=H8E703_9MICO rbh
Molecular chaperone DnaJ {ECO:0000313|EMBL:EXJ52156.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
dnaJ; DnaJ-class molecular chaperone; K03686 molecular chaperone DnaJ
SCNpilot_expt_500_bf_scaffold_6132_9
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5445..5831)
DNA (387bp) protein (129aa)
Protein GrpE n=2 Tax=Microbacterium RepID=H8E702_9MICO
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
molecular chaperone GrpE; K03687 molecular chaperone GrpE
SCNpilot_expt_500_bf_scaffold_6132_10
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5973..7844)
DNA (1872bp) protein (624aa)
Chaperone protein DnaK n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E701_9MICO rbh
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
dnaK; molecular chaperone; K04043 molecular chaperone DnaK
SCNpilot_expt_500_bf_scaffold_6132_11
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7937..9265)
DNA (1329bp) protein (443aa)
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
deaD; superfamily II DNA and RNA helicase; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
ATP-dependent RNA helicase DeaD n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A7D9_9MICO
Displaying 11 items

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