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SCNpilot_expt_500_bf_scaffold_6158

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_6158_1
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2..616
DNA (615bp) protein (205aa)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000369D365
Ig domain-containing protein
SCNpilot_expt_500_bf_scaffold_6158_2
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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774..2084
DNA (1311bp) protein (437aa)
DivIVA domain-containing protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ADY4_9MICO rbh
DivIVA domain-containing protein {ECO:0000313|EMBL:EPD86511.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
cell division initiation protein
SCNpilot_expt_500_bf_scaffold_6158_3
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2115..3104)
DNA (990bp) protein (330aa)
threonine aldolase; K01620 threonine aldolase [EC:4.1.2.5]
Aromatic amino acid beta-eliminating lyase/threonine aldolase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E559_9MICO
Aromatic amino acid beta-eliminating lyase/threonine aldolase {ECO:0000313|EMBL:EIC07998.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
SCNpilot_expt_500_bf_scaffold_6158_4
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3215..3889)
DNA (675bp) protein (225aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E558_9MICO
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EIC07997.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
short-chain alcohol dehydrogenase
SCNpilot_expt_500_bf_scaffold_6158_5
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3882..5387)
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AWQ1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86507.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_6158_6
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5459..5905
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003149769
AsnC family transcriptional regulator {ECO:0000313|EMBL:EXJ53099.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
SCNpilot_expt_500_bf_scaffold_6158_7
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5992..7173
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Microbacterium sp. 11MF RepID=UPI00036E60E0 rbh
Histidine kinase dimerization and phosphoacceptor region {ECO:0000313|EMBL:EZP28312.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
signal transduction histidine kinase
SCNpilot_expt_500_bf_scaffold_6158_8
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7170..7829
DNA (660bp) protein (220aa)
Response regulator receiver n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E553_9MICO
Response regulator receiver {ECO:0000313|EMBL:EIC07992.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
LuxR family two component transcriptional regulator
SCNpilot_expt_500_bf_scaffold_6158_9
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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8280..9137
DNA (858bp) protein (286aa)
Antimicrobial peptide ABC transporter permease protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2YWH0_9MICO rbh
ABC transporter {ECO:0000313|EMBL:EXJ53102.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
ABC transporter; K02003 putative ABC transport system ATP-binding protein rbh
SCNpilot_expt_500_bf_scaffold_6158_10
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9134..10612
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ABI5_9MICO
Peptide ABC transporter permease {ECO:0000313|EMBL:KIC59295.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein; K02004 putative ABC transport system permease protein rbh
SCNpilot_expt_500_bf_scaffold_6158_11
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10735..11241)
DNA (507bp) protein (169aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E550_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC07989.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_6158_12
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11375..12550
DNA (1176bp) protein (392aa)
Beta-glucosidase, glycosyl hydrolase family 3 {ECO:0000313|EMBL:EZP28307.1}; EC=3.2.1.- {ECO:0000313|EMBL:EZP28307.1};; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
beta-glucosidase-like glycosyl hydrolase; K05349 beta-glucosidase [EC:3.2.1.21]
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI0003632F4D
SCNpilot_expt_500_bf_scaffold_6158_13
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12510..13772
DNA (1263bp) protein (421aa)
Beta-glucosidase, glycosyl hydrolase family 3 {ECO:0000313|EMBL:EZP28307.1}; EC=3.2.1.- {ECO:0000313|EMBL:EZP28307.1};; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
beta-glucosidase-like glycosyl hydrolase; K05349 beta-glucosidase [EC:3.2.1.21]
hypothetical protein n=1 Tax=Microbacterium sp. 11MF RepID=UPI00037D7D85
SCNpilot_expt_500_bf_scaffold_6158_14
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14166..14399
DNA (234bp) protein (78aa)
2-phosphosulfolactate phosphatase {ECO:0000256|SAAS:SAAS00085834}; EC=3.1.3.71 {ECO:0000256|SAAS:SAAS00085834};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
Phosphosulfolactate phosphohydrolase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E549_9MICO
phosphosulfolactate phosphohydrolase
SCNpilot_expt_500_bf_scaffold_6158_15
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14911..15444)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BCW7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ53107.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
TPR repeat
SCNpilot_expt_500_bf_scaffold_6158_16
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15545..16405)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ABH9_9MICO rbh
Spermidine synthase {ECO:0000313|EMBL:EXJ53108.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
spermidine synthase
SCNpilot_expt_500_bf_scaffold_6158_17
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16441..17196
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037C33E6 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC59300.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
lactam utilization protein B; K07160 UPF0271 protein
SCNpilot_expt_500_bf_scaffold_6158_18
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17522..17929
DNA (408bp) protein (136aa)
allophanate hydrolase subunit (EC:3.5.1.54)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003808990
Allophanate hydrolase {ECO:0000313|EMBL:KIC59301.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
Displaying 18 items

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