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SCNpilot_expt_500_bf_scaffold_6974

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_6974_1
BJP_08E140C01_10KDA_Methylophilales_47_88, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(199..945)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00036ABE93
IstB domain-containing protein ATP-binding protein
Tax=BJP_08E140C01_10KDA_Methylophilales_47_88
SCNpilot_expt_500_bf_scaffold_6974_2
Reinekea blandensis, Reinekea, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(935..1165)
DNA (231bp) protein (77aa)
Transposase, IS21 family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4B8W6_9GAMM
Transposase, IS21 family protein {ECO:0000313|EMBL:EAR11067.1}; TaxID=314283 species="Bacteria; Proteobacteria; Gammaproteobacteria; Reinekea.;" source="Reinekea blandensis MED297.;"
ista17; putative transposase for insertion sequence IS408
SCNpilot_expt_500_bf_scaffold_6974_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1134..2462)
DNA (1329bp) protein (443aa)
Integrase catalytic region protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U2L0_ALIDB
Integrase catalytic region protein
Integrase catalytic region protein {ECO:0000313|EMBL:ADV02221.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_500_bf_scaffold_6974_4

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3014..3457
DNA (444bp) protein (148aa)
Transcriptional regulator, XRE family n=2 Tax=mine drainage metagenome RepID=T0YYV8_9ZZZZ
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EQD38243.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
helix-turn-helix domain-containing protein
SCNpilot_expt_500_bf_scaffold_6974_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3517..4017
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEM7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97918.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_expt_500_bf_scaffold_6974_6
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4387..5079)
DNA (693bp) protein (231aa)
Fis family transcriptional regulator n=1 Tax=Dyella japonica RepID=UPI0003160FF2 rbh
Transcriptional regulator {ECO:0000313|EMBL:AHX14601.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
two component winged helix family transcriptional regulator; K07667 two-component system, OmpR family, KDP operon response regulator KdpE
SCNpilot_expt_500_bf_scaffold_6974_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5076..5729)
DNA (654bp) protein (218aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
KdpD; two-component system, sensor protein, kdpd; K07646 two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
Putative two-component sensor histidine kinase potassium transport regulator protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W168_9GAMM
Displaying 7 items

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