ggKbase home page

SCNpilot_expt_500_bf_scaffold_9182

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_9182_1
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..566)
DNA (564bp) protein (188aa)
rRNA methylase; K00599 [EC:2.1.1.-]
rRNA methylase n=1 Tax=Microbacterium sp. TS-1 RepID=U2YJ29_9MICO
rRNA methylase {ECO:0000313|EMBL:GAD32929.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
SCNpilot_expt_500_bf_scaffold_9182_2
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

789..1640
DNA (852bp) protein (284aa)
NAD-dependent deacetylase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2X2_9MICO rbh
NAD-dependent deacetylase {ECO:0000313|EMBL:EXJ51266.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
NAD-dependent protein deacetylase, SIR2 family
SCNpilot_expt_500_bf_scaffold_9182_3
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1675..2298
DNA (624bp) protein (208aa)
fructose-2,6-bisphosphatase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1]
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003781E6C
Fructose-2,6-bisphosphatase {ECO:0000313|EMBL:EXJ51265.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
SCNpilot_expt_500_bf_scaffold_9182_4
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2304..3116)
DNA (813bp) protein (271aa)
HpcH/HpaI aldolase; K01644 citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.6 4.1.3.34] rbh
HpcH/HpaI aldolase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2X0_9MICO
Citrate lyase subunit beta {ECO:0000313|EMBL:EXJ51264.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
SCNpilot_expt_500_bf_scaffold_9182_5
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3116..3589)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000317A7E3
Bifunctional protein PaaZ {ECO:0000313|EMBL:KJL44188.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
acyl dehydratase
SCNpilot_expt_500_bf_scaffold_9182_6
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3594..4730)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AMR2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD83472.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
fadE19; acyl-CoA dehydrogenase
SCNpilot_expt_500_bf_scaffold_9182_7
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4858..5472
DNA (615bp) protein (205aa)
Regulatory protein TetR n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2W8_9MICO
Regulatory protein TetR {ECO:0000313|EMBL:EIC08848.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
TetR family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_9182_8
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5480..6853)
DNA (1374bp) protein (458aa)
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B4G6_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD83474.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
SCNpilot_expt_500_bf_scaffold_9182_9
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6850..7278)
DNA (429bp) protein (143aa)
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
2-oxoisovalerate dehydrogenase subunit beta n=1 Tax=Microbacterium yannicii RepID=UPI000308A48C
Transketolase central region {ECO:0000313|EMBL:EIC08846.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
SCNpilot_expt_500_bf_scaffold_9182_10
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7316..7792)
DNA (477bp) protein (159aa)
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
2-oxoisovalerate dehydrogenase subunit beta n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003644EA4
2-oxoisovalerate dehydrogenase subunit beta {ECO:0000313|EMBL:EZP29548.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
SCNpilot_expt_500_bf_scaffold_9182_11
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7794..8543)
DNA (750bp) protein (250aa)
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit; K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
Dehydrogenase E1 component n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2W5_9MICO
Pyruvate dehydrogenase {ECO:0000313|EMBL:KIC57428.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
SCNpilot_expt_500_bf_scaffold_9182_12
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8747..9514
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AMR7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD83477.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
transcriptional regulator
SCNpilot_expt_500_bf_scaffold_9182_13
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9462..10166)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A332_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD83478.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
permease of the drug/metabolite transporter (DMT) superfamily
SCNpilot_expt_500_bf_scaffold_9182_14
unknown

Not on your lists

10233..10544
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_9182_15
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10575..10853
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2W2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC08842.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding
Displaying 15 items

View Taxonomy