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SCNpilot_expt_500_bf_scaffold_8002

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_8002_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..249)
DNA (249bp) protein (83aa)
DNA-cytosine methyltransferase; K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37]
RNA polymerase sigma factor n=1 Tax=Rhodanobacter sp. 115 RepID=I4WBA8_9GAMM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_expt_500_bf_scaffold_8002_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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432..1043
DNA (612bp) protein (204aa)
DNA mismatch endonuclease vsr; K07458 DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
DNA mismatch endonuclease Vsr n=1 Tax=Rhodanobacter sp. 115 RepID=I4WBA9_9GAMM
DNA mismatch endonuclease Vsr {ECO:0000313|EMBL:EIL96750.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_expt_500_bf_scaffold_8002_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(970..1221)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WBB0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96751.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_8002_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1353..1589
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WBB1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96752.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_8002_5
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2944..3798
DNA (855bp) protein (285aa)
Metal dependent phosphohydrolase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WBB3_9GAMM rbh
Metal dependent phosphohydrolase {ECO:0000313|EMBL:EIL96754.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_expt_500_bf_scaffold_8002_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3974..4225
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5L7S3_STEMA
Uncharacterized protein {ECO:0000313|EMBL:KDE89580.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_8002_7
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4750..5085)
DNA (336bp) protein (112aa)
aromatic ring-cleaving dioxygenase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B63542
Uncharacterized protein {ECO:0000313|EMBL:KFN41550.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
aromatic ring-opening dioxygenase
SCNpilot_expt_500_bf_scaffold_8002_8
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5307..5621)
DNA (315bp) protein (105aa)
Methylisocitrate lyase {ECO:0000256|RuleBase:RU361121}; EC=4.1.3.30 {ECO:0000256|RuleBase:RU361121};; TaxID=1173780 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. diarizonae serovar 60:r:e,n,x,z15 str.; 01-0170.;"
prpB; methylisocitrate lyase (EC:4.1.3.30); K03417 methylisocitrate lyase [EC:4.1.3.30]
2-methylisocitrate lyase n=1 Tax=Thiomonas sp. FB-6 RepID=UPI00036CDDAE
SCNpilot_expt_500_bf_scaffold_8002_9

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comp(5839..6429)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00035CA830 rbh
Putative 2-hydroxychromene-2-carboxylate isomerase {ECO:0000313|EMBL:BAH90413.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
nahD; DSBA oxidoreductase
SCNpilot_expt_500_bf_scaffold_8002_10
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6684..6842)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SI35_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM95224.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
Displaying 10 items

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