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SCNpilot_expt_500_bf_scaffold_8061

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_8061_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..298
DNA (297bp) protein (99aa)
Glucose sorbosone dehydrogenase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTG7_9GAMM
Glucose sorbosone dehydrogenase {ECO:0000313|EMBL:EIL90508.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
glucose sorbosone dehydrogenase
SCNpilot_expt_500_bf_scaffold_8061_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(308..739)
DNA (432bp) protein (144aa)
Rifampin ADP-ribosyl transferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3F3_9GAMM
Rifampin ADP-ribosyl transferase {ECO:0000313|EMBL:EIL93994.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
rifampin ADP-ribosyl transferase
SCNpilot_expt_500_bf_scaffold_8061_3
unknown

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comp(1016..1963)
DNA (948bp) protein (316aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_8061_4
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2092..2541)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI0003754F34
acetyltransferase; K06975
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
SCNpilot_expt_500_bf_scaffold_8061_5
unknown

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comp(2626..2946)
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_8061_6
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3061..3372)
DNA (312bp) protein (104aa)
Transcriptional regulator, XRE family n=2 Tax=Nitrosococcus oceani RepID=Q3JED3_NITOC
XRE family transcriptional regulator; K07726 putative transcriptional regulator
XRE family transcriptional regulator {ECO:0000313|EMBL:KFI20767.1}; TaxID=314279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani C-27.;"
SCNpilot_expt_500_bf_scaffold_8061_7
Mesorhizobium sp. L103C565B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3623..4567)
DNA (945bp) protein (315aa)
UPI0003CFF24C related cluster n=1 Tax=unknown RepID=UPI0003CFF24C
Uncharacterized protein {ECO:0000313|EMBL:ESZ50743.1}; TaxID=1287094 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C565B0.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_8061_8
unknown

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comp(4557..5090)
DNA (534bp) protein (178aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_8061_9
Mesorhizobium sp. L103C565B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5087..5878)
DNA (792bp) protein (264aa)
Site-specific DNA-methyltransferase (adenine-specific) {ECO:0000256|RuleBase:RU361257}; EC=2.1.1.72 {ECO:0000256|RuleBase:RU361257};; TaxID=1287094 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C565B0.;"
dam; N6 adenine-specific DNA methyltransferase, D12 class (EC:2.1.1.72)
UPI0003D01D9D related cluster n=1 Tax=unknown RepID=UPI0003D01D9D rbh
SCNpilot_expt_500_bf_scaffold_8061_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5945..6505)
DNA (561bp) protein (187aa)
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Urocanate hydratase n=1 Tax=Rhodanobacter denitrificans RepID=I4WS18_9GAMM
Displaying 10 items

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