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SCNpilot_expt_500_bf_scaffold_8097

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_8097_1
Kocuria marina, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(528..860)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Gordonia sihwensis NBRC 108236 RepID=L7LPR6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KHE73669.1}; TaxID=223184 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria marina.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_8097_2
Mesorhizobium sp. UASWS1009, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(857..1909)
DNA (1053bp) protein (351aa)
integrase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000369AE1A rbh
Contig118, whole genome shotgun sequence {ECO:0000313|EMBL:KIU55633.1}; TaxID=1566387 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. UASWS1009.;"
integrase/recombinase rbh
SCNpilot_expt_500_bf_scaffold_8097_3
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2092..2835
DNA (744bp) protein (248aa)
Type II secretion system protein E n=2 Tax=Microbacterium RepID=H8E9Q6_9MICO
Pilus assembly protein CpaF {ECO:0000313|EMBL:KIC57692.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
type II secretion system protein E; K02283 pilus assembly protein CpaF
SCNpilot_expt_500_bf_scaffold_8097_4
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2832..3689
DNA (858bp) protein (286aa)
Type II secretion system F domain-containing protein n=2 Tax=Microbacterium RepID=H8E9Q7_9MICO rbh
Type II secretion protein F {ECO:0000313|EMBL:KIC57691.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
putative pilus assembly protein; K12510 tight adherence protein B
SCNpilot_expt_500_bf_scaffold_8097_5
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4048..4551
DNA (504bp) protein (168aa)
Type II secretion system F domain-containing protein n=2 Tax=Microbacterium RepID=H8E9Q8_9MICO
Type II secretion protein F {ECO:0000313|EMBL:KIC57784.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
putative pilus assembly protein; K12511 tight adherence protein C
SCNpilot_expt_500_bf_scaffold_8097_6
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4602..4781
DNA (180bp) protein (60aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003129B80
Uncharacterized protein {ECO:0000313|EMBL:GAD33165.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_8097_7
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4798..5187
DNA (390bp) protein (130aa)
TadE family protein n=2 Tax=Microbacterium RepID=H8E9R0_9MICO
TadE family protein {ECO:0000313|EMBL:KIC57688.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
conserved secreted protein
SCNpilot_expt_500_bf_scaffold_8097_8
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5162..5644
DNA (483bp) protein (161aa)
TadE family protein n=2 Tax=Microbacterium RepID=H8E9R1_9MICO
TadE family protein {ECO:0000313|EMBL:KIC57687.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_8097_9
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5626..6072
DNA (447bp) protein (149aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E9R2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC57686.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_8097_10
Brevibacterium linens, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6142..6504
DNA (363bp) protein (121aa)
Thioredoxin n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SD03_NOCSJ
Thioredoxin {ECO:0000313|EMBL:KHS51018.1}; TaxID=1703 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium linens.;"
thioredoxin
SCNpilot_expt_500_bf_scaffold_8097_11
unknown

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6512..6745
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_8097_12
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6822..7403)
DNA (582bp) protein (194aa)
Major facilitator superfamily MFS_1 n=2 Tax=Microbacterium RepID=H8E9R4_9MICO
Major facilitator transporter {ECO:0000313|EMBL:KIC57684.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
permease of the major facilitator superfamily
SCNpilot_expt_500_bf_scaffold_8097_13
unknown

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7535..8080
DNA (546bp) protein (182aa)

This feature has no annotations

Displaying 13 items

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