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SCNpilot_expt_500_bf_scaffold_8145

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_8145_1
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1..615)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0N0_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:GAE64144.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_8145_2
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(627..1067)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0M9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK34028.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_8145_3
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1072..1683)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0M8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK34027.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
chromosome partitioning ATPase
SCNpilot_expt_500_bf_scaffold_8145_4
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1683..1805)
DNA (123bp) protein (41aa)
Chromosome partitioning ATPase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S629_PEDSD
chromosome partitioning ATPase
Uncharacterized protein {ECO:0000313|EMBL:GAE64142.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
SCNpilot_expt_500_bf_scaffold_8145_5
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2574..3005
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S631_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY52134.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_expt_500_bf_scaffold_8145_6
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3014..3436
DNA (423bp) protein (141aa)
relaxase n=1 Tax=Empedobacter brevis RepID=UPI00036EAB12
Relaxase {ECO:0000313|EMBL:KFF20035.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
Relaxase/mobilization nuclease family protein
SCNpilot_expt_500_bf_scaffold_8145_7
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3492..4247
DNA (756bp) protein (252aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0M5_9FLAO
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EFK56952.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
Relaxase/mobilization nuclease family protein
SCNpilot_expt_500_bf_scaffold_8145_8
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4359..4733
DNA (375bp) protein (125aa)
Transcriptional regulator, ArsR family n=3 Tax=Bacteroidetes RepID=F0S633_PEDSD
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EFK56953.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
SCNpilot_expt_500_bf_scaffold_8145_9
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4730..5329
DNA (600bp) protein (200aa)
Heavy metal transport/detoxification protein n=3 Tax=Bacteroidetes RepID=F0S634_PEDSD rbh
heavy metal transport/detoxification protein rbh
Heavy metal transporter {ECO:0000313|EMBL:KEQ31112.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
SCNpilot_expt_500_bf_scaffold_8145_10
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5331..5537
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Sphingobacteriaceae RepID=F0S635_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY52138.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_expt_500_bf_scaffold_8145_11
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5735..7735
DNA (2001bp) protein (667aa)
TraG family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0M1_9FLAO
Strain DSM 12611 Contig03, whole genome shotgun sequence {ECO:0000313|EMBL:KIO54472.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_8145_12
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7898..8404
DNA (507bp) protein (169aa)
Transcriptional regulator, AraC family n=2 Tax=Sphingobacterium spiritivorum RepID=D7VNR6_9SPHI
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFK57563.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
AraC family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_8145_13
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8420..8836)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FXE5_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EEI92386.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
ferric uptake regulator family protein; K03711 Fur family transcriptional regulator, ferric uptake regulator
SCNpilot_expt_500_bf_scaffold_8145_14
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8872..9576
DNA (705bp) protein (235aa)
TonB-dependent receptor n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FXE6_9SPHI
TonB-dependent receptor {ECO:0000313|EMBL:EEI92387.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
SCNpilot_expt_500_bf_scaffold_8145_15
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9621..10712
DNA (1092bp) protein (364aa)
TonB-dependent receptor n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FXE6_9SPHI
TonB-dependent receptor {ECO:0000313|EMBL:EEI92387.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
SCNpilot_expt_500_bf_scaffold_8145_16
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10912..11178
DNA (267bp) protein (89aa)
TonB-dependent receptor n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VNR8_9SPHI
TonB-dependent receptor {ECO:0000313|EMBL:EFK57565.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
SCNpilot_expt_500_bf_scaffold_8145_17
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11214..11777
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FXE7_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:EEI92388.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_8145_18
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12042..12152
DNA (111bp) protein (37aa)
copper-translocating P-type ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Copper-exporting ATPase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8X1_9FLAO
Copper-transporting ATPase CopA {ECO:0000313|EMBL:GAE64128.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
Displaying 18 items

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