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SCNpilot_expt_500_bf_scaffold_8429

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_8429_1
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..142
DNA (141bp) protein (47aa)
Phenol hydrolase activator n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SI50_METPP
dmpM; phenol hydrolase activator
Phenol hydrolase activator {ECO:0000313|EMBL:ABM95239.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
SCNpilot_expt_500_bf_scaffold_8429_2
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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182..1744
DNA (1563bp) protein (521aa)
phyC; phenol 2-monooxygenase P3 protein (EC:1.14.13.25); K08684 methane monooxygenase [EC:1.14.13.25]
Phenol hydroxylase P3 protein (Phenol 2-monooxygenase P3 component) {ECO:0000313|EMBL:ABF08663.1}; EC=1.14.13.25 {ECO:0000313|EMBL:ABF08663.1};; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
Phenol hydroxylase P3 protein (Phenol 2-monooxygenase P3 component) n=2 Tax=Cupriavidus RepID=Q1LMG3_RALME
SCNpilot_expt_500_bf_scaffold_8429_3

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1830..2087
DNA (258bp) protein (86aa)
phenol hydroxylase region (EC:1.14.13.7)
Phenol hydroxylase subunit n=3 Tax=Bacteria RepID=A5HMI0_ALCFA
Phenol hydroxylase {ECO:0000313|EMBL:BAM45387.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_expt_500_bf_scaffold_8429_4
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2099..3001
DNA (903bp) protein (301aa)
dmpP; phenol hydrolase reductase; K03380 phenol 2-monooxygenase [EC:1.14.13.7]
Phenol hydrolase reductase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SI47_METPP
Phenol hydrolase reductase {ECO:0000313|EMBL:ABM95236.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
SCNpilot_expt_500_bf_scaffold_8429_5
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2998..3129
DNA (132bp) protein (44aa)
Phenol hydroxylase P5 protein {ECO:0000313|EMBL:EWS60632.1}; EC=1.14.13.7 {ECO:0000313|EMBL:EWS60632.1};; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
dmpP; phenol hydrolase reductase; K03380 phenol 2-monooxygenase [EC:1.14.13.7]
Phenol hydrolase reductase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SI47_METPP
SCNpilot_expt_500_bf_scaffold_8429_6
Diaphorobacter sp. J5-51, Diaphorobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3139..3564
DNA (426bp) protein (142aa)
ferredoxin; K00529 ferredoxin--NAD+ reductase [EC:1.18.1.3]
PyrD n=1 Tax=Diaphorobacter sp. J5-51 RepID=K4K2B1_9BURK
PyrD {ECO:0000313|EMBL:AFU93039.1}; TaxID=680496 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Diaphorobacter.;" source="Diaphorobacter sp. J5-51.;"
SCNpilot_expt_500_bf_scaffold_8429_7
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3417..4217)
DNA (801bp) protein (267aa)
Catechol 2,3-dioxygenase {ECO:0000313|EMBL:AAC13787.1}; EC=1.13.11.2 {ECO:0000313|EMBL:AAC13787.1};; TaxID=329 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (Burkholderia pickettii).;"
Catechol 2,3-dioxygenase n=1 Tax=Ralstonia pickettii RepID=Q59220_RALPI
SCNpilot_expt_500_bf_scaffold_8429_8
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4665..4955
DNA (291bp) protein (97aa)
Hypothetical CmpX-like protein n=1 Tax=Comamonas sp. JS765 RepID=Q9F9J1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:AIO46738.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_8429_9
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4952..6409
DNA (1458bp) protein (486aa)
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase oxidoreductase (EC:1.2.1.60); K10217 aminomuconate-semialdehyde dehydrogenase [EC:1.2.1.32]
2-hydroxymuconic semialdehyde dehydrogenase {ECO:0000313|EMBL:EWS54687.1}; EC=1.2.1.85 {ECO:0000313|EMBL:EWS54687.1};; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
2-hydroxymuconic semialdehyde dehydrogenase n=1 Tax=Nevskia ramosa RepID=UPI0003B55C33 rbh
SCNpilot_expt_500_bf_scaffold_8429_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6744..7193
DNA (450bp) protein (150aa)
2,6-dioxo-6-phenylhexa-3-enoate hydrolase {ECO:0000313|EMBL:AEB82709.1}; EC=3.7.1.8 {ECO:0000313|EMBL:AEB82709.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
2-hydroxy-6-oxo-2,4-heptadienoate hydrolase n=1 Tax=Nevskia ramosa RepID=UPI0003B38569
alpha/beta hydrolase
SCNpilot_expt_500_bf_scaffold_8429_11
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7198..7986
DNA (789bp) protein (263aa)
4-oxalocrotonate decarboxylase (EC:4.2.1.80); K02554 2-keto-4-pentenoate hydratase [EC:4.2.1.80] rbh
2-keto-4-pentenoate hydratase n=1 Tax=Nevskia ramosa RepID=UPI0003B66201 rbh
4-oxalocrotonate decarboxylase {ECO:0000313|EMBL:EIT70471.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
SCNpilot_expt_500_bf_scaffold_8429_12
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7998..8786
DNA (789bp) protein (263aa)
2-hydroxyhexa-2,4-dienoate hydratase {ECO:0000313|EMBL:EWS54690.1}; EC=4.2.1.132 {ECO:0000313|EMBL:EWS54690.1};; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
4-oxalocrotonate decarboxylase; K01617 4-oxalocrotonate decarboxylase [EC:4.1.1.77] rbh
4-oxalocrotonate decarboxylase n=1 Tax=Nevskia ramosa RepID=UPI0003B40B38 rbh
SCNpilot_expt_500_bf_scaffold_8429_13
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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8808..9713
DNA (906bp) protein (302aa)
acetaldehyde dehydrogenase (EC:1.2.1.10); K04073 acetaldehyde dehydrogenase [EC:1.2.1.10]
Acetaldehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01657, ECO:0000256|SAAS:SAAS00042164}; EC=1.2.1.10 {ECO:0000256|HAMAP-Rule:MF_01657, ECO:0000256|SAAS:SAAS00042125};; Acetaldehyde dehydrogenase [acetylating] {ECO:0000256|HAMAP-Rule:MF_01657}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
Acetaldehyde dehydrogenase n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4ZPH3_THASP
SCNpilot_expt_500_bf_scaffold_8429_14
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9724..10506
DNA (783bp) protein (261aa)
4-hydroxy-2-oxovalerate aldolase {ECO:0000256|HAMAP-Rule:MF_01656, ECO:0000256|SAAS:SAAS00035546}; Short=HOA {ECO:0000256|HAMAP-Rule:MF_01656};; EC=4.1.3.39 {ECO:0000256|HAMAP-Rule:MF_01656, ECO:0000256|SAAS:SAAS00035546};; 4-hydroxy-2-keto-pentanoic acid aldolase {ECO:0000256|HAMAP-Rule:MF_01656}; 4-hydroxy-2-oxopentanoate aldolase {ECO:0000256|HAMAP-Rule:MF_01656}; 4-hydroxy-2-oxovalerate aldolase; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.
mhpE; 4-hydroxy-2-ketovalerate aldolase (EC:4.1.3.-); K01666 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
4-hydroxy-2-oxovalerate aldolase 2 n=1 Tax=Azoarcus sp. (strain BH72) RepID=HOA2_AZOSB
Displaying 14 items

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