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SCNpilot_expt_500_bf_scaffold_8979

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_8979_1
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..281)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI00036E7B0C
Putative L-lactate dehydrogenase operon regulatory protein {ECO:0000313|EMBL:KJL28767.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
transcriptional regulator
SCNpilot_expt_500_bf_scaffold_8979_2
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(305..1078)
DNA (774bp) protein (258aa)
short-chain dehydrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003457F76
Short-chain dehydrogenase {ECO:0000313|EMBL:KEP74533.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
dehydrogenase with different specificities
SCNpilot_expt_500_bf_scaffold_8979_3
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1101..2468)
DNA (1368bp) protein (456aa)
NAD-dependent aldehyde dehydrogenase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFX5_MICTS
NAD-dependent aldehyde dehydrogenase
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:BAJ74020.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_8979_4
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2465..3259)
DNA (795bp) protein (265aa)
glutamine amidotransferase n=1 Tax=Microbacterium paraoxydans RepID=UPI0003609E9C
Putative glutamine amidotransferase {ECO:0000313|EMBL:EZP28414.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
glutamine amidotransferase; K07010 putative glutamine amidotransferase
SCNpilot_expt_500_bf_scaffold_8979_5
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3240..3704)
DNA (465bp) protein (155aa)
glutamine synthetase; K01915 glutamine synthetase [EC:6.3.1.2]
Glutamate--ammonia ligase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KLJ5_9MICO
Glutamine synthetase {ECO:0000313|EMBL:KEP74530.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
SCNpilot_expt_500_bf_scaffold_8979_6
unknown

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3719..3892
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_8979_7
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4719..6269
DNA (1551bp) protein (517aa)
amino acid ABC transporter permease n=1 Tax=Microbacterium paraoxydans RepID=UPI00037BFFCF rbh
Amino acid transporter {ECO:0000313|EMBL:EZP28416.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
amino acid transporters rbh
SCNpilot_expt_500_bf_scaffold_8979_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6558..7253
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Humibacter albus RepID=UPI0003B481C7
IPT/TIG domain protein {ECO:0000313|EMBL:ERK69981.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_8979_9
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7421..8779)
DNA (1359bp) protein (453aa)
ATPase AAA-2 domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5C3_9MICO
ATPase AAA-2 domain protein {ECO:0000313|EMBL:EIC08062.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
clpC; ATPase with chaperone activity, ATP-binding subunit; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC
Displaying 9 items

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