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SCNpilot_expt_500_bf_scaffold_5098

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_5098_1
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..482)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AGD2_9MICO
GntR family transcriptional regulator {ECO:0000313|EMBL:KIC57990.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
transcriptional regulator
SCNpilot_expt_500_bf_scaffold_5098_2
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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838..972
DNA (135bp) protein (45aa)
Cold-shock protein DNA-binding protein {ECO:0000313|EMBL:EIC06542.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
SCNpilot_expt_500_bf_scaffold_5098_3
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1004..1678)
DNA (675bp) protein (225aa)
phosphatase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18]
Phosphoglycolate phosphatase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AUN3_9MICO rbh
Phosphatase {ECO:0000313|EMBL:EXJ52111.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
SCNpilot_expt_500_bf_scaffold_5098_4
unknown

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1811..2326
DNA (516bp) protein (172aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5098_5
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2395..3090)
DNA (696bp) protein (232aa)
Endonuclease NucS {ECO:0000256|HAMAP-Rule:MF_00722}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00722};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
endonuclease n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037D0819 rbh
nuclease of the RecB family; K07503 hypothetical protein
SCNpilot_expt_500_bf_scaffold_5098_6
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3245..4315)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A9H1_9MICO
MFS transporter permease {ECO:0000313|EMBL:EXJ52114.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
permease of the major facilitator superfamily
SCNpilot_expt_500_bf_scaffold_5098_7
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4386..5435
DNA (1050bp) protein (350aa)
Regulatory protein LacI n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E968_9MICO rbh
Regulatory protein LacI {ECO:0000313|EMBL:EIC06548.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
transcriptional regulator
SCNpilot_expt_500_bf_scaffold_5098_8
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5488..8493
DNA (3006bp) protein (1002aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ABN8_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD85811.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
NADH:ubiquinone oxidoreductase subunit 5 (chain L)/multisubunit Na+/H+ antiporter, MnhA subunit; K05565 multicomponent Na+:H+ antiporter subunit A
SCNpilot_expt_500_bf_scaffold_5098_9
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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8490..9032
DNA (543bp) protein (181aa)
Multicomponent Na+:H+ antiporter subunit C n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AGB6_9MICO rbh
Sodium:proton antiporter {ECO:0000313|EMBL:EXJ52117.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
multisubunit Na+/H+ antiporter, MnhC subunit; K05567 multicomponent Na+:H+ antiporter subunit C
Displaying 9 items

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