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SCNpilot_expt_500_bf_scaffold_5323

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_5323_1
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..408)
DNA (408bp) protein (136aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
peptide methionine sulfoxide reductase; K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
methionine sulfoxide reductase A n=1 Tax=Microbacterium barkeri RepID=UPI000308D9DB
SCNpilot_expt_500_bf_scaffold_5323_2
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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647..1858
DNA (1212bp) protein (404aa)
Major facilitator superfamily MFS_1 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E691_9MICO
MFS transporter {ECO:0000313|EMBL:KIC59962.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
arabinose efflux permease family protein rbh
SCNpilot_expt_500_bf_scaffold_5323_3
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1862..2881)
DNA (1020bp) protein (340aa)
6-phosphogluconolactonase (EC:3.1.1.31); K07404 6-phosphogluconolactonase [EC:3.1.1.31] rbh
6-phosphogluconolactonase n=2 Tax=Microbacterium RepID=H8E688_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD85005.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
SCNpilot_expt_500_bf_scaffold_5323_4
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2976..3533
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Microbacterium RepID=UPI00036CEEA2
Nuclease {ECO:0000313|EMBL:EZP28060.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
hypothetical protein; K06860 uncharacterized protein
SCNpilot_expt_500_bf_scaffold_5323_5
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3544..4395
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00037B66D7
Putative permease {ECO:0000313|EMBL:GAD33819.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
periplasmic serine protease
SCNpilot_expt_500_bf_scaffold_5323_6
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4379..5305)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A913_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EXJ52274.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_5323_7
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5519..6085
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A797_9MICO rbh
NUDIX hydrolase {ECO:0000313|EMBL:KIC59970.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
NTP pyrophosphohydrolase including oxidative damage repair enzyme
SCNpilot_expt_500_bf_scaffold_5323_8
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6218..6877
DNA (660bp) protein (220aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
deoxyribose-phosphate aldolase; K01619 deoxyribose-phosphate aldolase [EC:4.1.2.4]
Deoxyribose-phosphate aldolase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2L7_CELGA
SCNpilot_expt_500_bf_scaffold_5323_9
R_OP11_45_11, Microgenomates, Bacteria

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comp(7193..7903)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E8F4_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_45_11_curated
SCNpilot_expt_500_bf_scaffold_5323_10
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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comp(7893..8546)
DNA (654bp) protein (218aa)
MarR family protein {ECO:0000313|EMBL:KJF17608.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
SCNpilot_expt_500_bf_scaffold_5323_11
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8808..9269
DNA (462bp) protein (154aa)
Sodium:dicarboxylate symporter n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E675_9MICO
Sodium:proton antiporter {ECO:0000313|EMBL:EXJ52280.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
proton/glutamate transport protein
Displaying 11 items

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