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SCNpilot_expt_500_bf_scaffold_5336

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_5336_1
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..337)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WYS8_COMTE
Uncharacterized protein {ECO:0000313|EMBL:EED68039.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5336_2
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(334..804)
DNA (471bp) protein (157aa)
peptidase n=1 Tax=Comamonas testosteroni RepID=UPI00036F985B
Plasmid conjugal transfer transmembrane protein {ECO:0000313|EMBL:GAO20591.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
traf peptidase, serine peptidase, merops family s26c
SCNpilot_expt_500_bf_scaffold_5336_3
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(890..1426)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EL24_9BURK
Transposon {ECO:0000313|EMBL:GAO20592.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5336_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1423..1707)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQE1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91431.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5336_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1704..2342)
DNA (639bp) protein (213aa)
Putative ParA/CobQ/CobB/MinD nucleotide binding domain protein n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FTG5_STRMK rbh
putative ParA/CobQ/CobB/MinD nucleotide binding domain-containing protein; K03496 chromosome partitioning protein rbh
Putative ParA/CobQ/CobB/MinD nucleotide binding domain protein {ECO:0000313|EMBL:CAQ44862.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
SCNpilot_expt_500_bf_scaffold_5336_6
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2596..3453)
DNA (858bp) protein (286aa)
RepA replication protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003708E4A rbh
Replication protein A {ECO:0000313|EMBL:GAO22426.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
replication initiator and transcription repressor protein rbh
SCNpilot_expt_500_bf_scaffold_5336_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3480..3761)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQD8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91428.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
putative transcriptional regulator (DNA binding protein)
SCNpilot_expt_500_bf_scaffold_5336_8
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3845..4615)
DNA (771bp) protein (257aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=S2XI81_DELAC rbh
Aspartate decarboxylase-like fold harboring protein {ECO:0000313|EMBL:GAO22428.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5336_9
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4946..5296)
DNA (351bp) protein (117aa)
Putative lipoprotein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIY7_ACIET
lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:AIJ46152.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
SCNpilot_expt_500_bf_scaffold_5336_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5550..5840
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa str. Stone 130 RepID=N2BQE0_PSEAI
XRE family transcriptional regulator {ECO:0000313|EMBL:EIK91425.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
helix-turn-helix domain protein
SCNpilot_expt_500_bf_scaffold_5336_11
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5882..6169)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Ralstonia solanacearum RepID=UPI0001817214
Uncharacterized protein {ECO:0000313|EMBL:KIL02513.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
hypothetical protein
Displaying 11 items

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