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SCNpilot_expt_500_bf_scaffold_5405

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_5405_1
Mycobacterium sp. MAC_080597_8934, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..459)
DNA (459bp) protein (153aa)
17 kDa surface antigen family protein n=1 Tax=Mycobacterium avium (strain 104) RepID=A0QB13_MYCA1
17 kDa surface antigen family protein
Glycine zipper family protein {ECO:0000313|EMBL:ETZ58011.1}; TaxID=1335322 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium sp. MAC_080597_8934.;"
SCNpilot_expt_500_bf_scaffold_5405_2
unknown

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comp(470..880)
DNA (411bp) protein (137aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5405_3
unknown

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comp(964..1344)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE12 RepID=UPI00037F9910
SCNpilot_expt_500_bf_scaffold_5405_4

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1451..1840
DNA (390bp) protein (130aa)
UPI0003CEC2BC related cluster n=1 Tax=unknown RepID=UPI0003CEC2BC
Marine sediment metagenome DNA, contig: S03H2_L04882 {ECO:0000313|EMBL:GAH43475.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_expt_500_bf_scaffold_5405_5
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1821..1982)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0BBF3_RHILV
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_58_19_curated
SCNpilot_expt_500_bf_scaffold_5405_6
unknown

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comp(2119..2862)
DNA (744bp) protein (248aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5405_7
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2819..3073)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY251 RepID=UPI00037913EB
Phage repressor {ECO:0000313|EMBL:BAQ81442.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
putative repressor CI from bacteriophage origin
SCNpilot_expt_500_bf_scaffold_5405_8
unknown

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4233..4481
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5405_9
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4478..5461
DNA (984bp) protein (328aa)
Probable streptomycin biosynthesis operon possible regulatory protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FSI7_9RHOB
Probable streptomycin biosynthesis operon possible regulatory protein {ECO:0000313|EMBL:EDM70689.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. AzwK-3b.;"
streptomycin biosynthesis operon regulatory protein, putative
SCNpilot_expt_500_bf_scaffold_5405_10
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5458..6984
DNA (1527bp) protein (509aa)
Putative helicase n=2 Tax=Burkholderia multivorans RepID=B9BQH5_9BURK rbh
Putative helicase {ECO:0000313|EMBL:EEE06870.1}; TaxID=513052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans CGD2.;"
helicase domain-containing protein rbh
SCNpilot_expt_500_bf_scaffold_5405_11
unknown

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7042..7224
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5405_12
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7364..9040
DNA (1677bp) protein (559aa)
C-5 cytosine-specific DNA methylase n=1 Tax=Ralstonia pickettii (strain 12J) RepID=B2U8L0_RALPJ rbh
C-5 cytosine-specific DNA methylase rbh
C-5 cytosine-specific DNA methylase {ECO:0000313|EMBL:ACD27486.1}; TaxID=402626 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12J).;"
SCNpilot_expt_500_bf_scaffold_5405_13
unknown

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9037..9270
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5405_14
Pseudomonas phage F116, Caudovirales, Viruses

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9267..9467
DNA (201bp) protein (67aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=I1AJM2_PSEAI
Putative uncharacterized protein {ECO:0000313|EMBL:AAT47212.1}; TaxID=280701 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Podoviridae.;" source="Pseudomonas phage F116.;"
hypothetical protein
Displaying 14 items

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