ggKbase home page

SCNpilot_expt_500_bf_scaffold_3159

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3159_1
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..113)
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BBC2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85919.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
predicted transcriptional regulator
SCNpilot_expt_500_bf_scaffold_3159_2
Corynebacterium glyciniphilum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(238..843)
DNA (606bp) protein (202aa)
Tetracyclin repressor domain protein n=21 Tax=Mycobacterium abscessus RepID=R4UD36_MYCAB
Transcriptional regulator, TetR-family {ECO:0000313|EMBL:AHW63576.1}; TaxID=1404245 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium glyciniphilum AJ 3170.;"
tetracyclin repressor domain protein
SCNpilot_expt_500_bf_scaffold_3159_3
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

937..1878
DNA (942bp) protein (314aa)
cation transporter n=1 Tax=Brachybacterium paraconglomeratum RepID=UPI00026C6FD4 rbh
Cation transporter {ECO:0000313|EMBL:EYT55080.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
putative cobalt-zinc-cadmium efflux protein; K03295 cation efflux system protein, CDF family
SCNpilot_expt_500_bf_scaffold_3159_4
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1903..2817)
DNA (915bp) protein (305aa)
Transcriptional regulator, LysR family n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0AVZ7_ARTS2
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABK05561.1}; TaxID=290399 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
SCNpilot_expt_500_bf_scaffold_3159_5
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2888..3928
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Streptomyces rapamycinicus RepID=UPI000382F6DE rbh
Uncharacterized protein {ECO:0000313|EMBL:EXU69842.1}; TaxID=1158056 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh5.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_3159_6
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3953..4834)
DNA (882bp) protein (294aa)
Putative NAD-dependent epimerase/dehydratase n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H7Y1_ACTM4 rbh
putative NAD-dependent epimerase/dehydratase rbh
Putative NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:BAL89118.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
SCNpilot_expt_500_bf_scaffold_3159_7
Kocuria palustris, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4865..5197)
DNA (333bp) protein (111aa)
4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Kocuria palustris PEL RepID=M2WEP8_9MICC
4Fe-4S ferredoxin, iron-sulfur binding protein {ECO:0000313|EMBL:EME37002.1}; TaxID=1236550 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria palustris PEL.;"
ferredoxin
SCNpilot_expt_500_bf_scaffold_3159_8
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5205..7103)
DNA (1899bp) protein (633aa)
Multicopper oxidase type 3 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E3G6_9MICO rbh
Multicopper oxidase type 3 {ECO:0000313|EMBL:EIC08303.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
multicopper oxidase type 3 rbh
Displaying 8 items

View Taxonomy