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SCNpilot_expt_500_bf_scaffold_3326

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3326_1
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2..406
DNA (405bp) protein (135aa)
Chaperone ClpB n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ACX4_9MICO
Protein disaggregation chaperone {ECO:0000313|EMBL:EXJ52148.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
ATPase; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB
SCNpilot_expt_500_bf_scaffold_3326_2
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(509..1258)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00036385EA
1,4-dihydroxy-2-naphthoate prenyltransferase {ECO:0000313|EMBL:KHK96614.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
4-hydroxybenzoate polyprenyltransferase
SCNpilot_expt_500_bf_scaffold_3326_3
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1255..2442)
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Microbacterium sp. 11MF RepID=UPI000370740E
2-polyprenyl-6-methoxyphenol hydroxylase {ECO:0000313|EMBL:CDK00063.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
2-polyprenyl-6-methoxyphenol hydroxylase
SCNpilot_expt_500_bf_scaffold_3326_4
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2439..3083)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI0003656018
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase {ECO:0000313|EMBL:CDK00062.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
SCNpilot_expt_500_bf_scaffold_3326_5
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3080..4189)
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000312D7E0
Predicted naringenin-chalcone synthase {ECO:0000313|EMBL:CDK00061.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
naringenin-chalcone synthase
SCNpilot_expt_500_bf_scaffold_3326_6
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4373..5509)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Agrococcus pavilionensis RW1 RepID=U1MRQ6_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:ERG64636.1}; TaxID=1330458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
Major facilitator superfamily permease
SCNpilot_expt_500_bf_scaffold_3326_7
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5567..6094
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000313E214
ArsR family transcriptional regulator {ECO:0000313|EMBL:KHK97614.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
ArsR family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_3326_8
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6104..6454)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A7H1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84536.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
nitroreductase
SCNpilot_expt_500_bf_scaffold_3326_9
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6633..7103
DNA (471bp) protein (157aa)
4-hydroxy-4-methyl-2-oxoglutarate aldolase {ECO:0000256|RuleBase:RU004338, ECO:0000256|SAAS:SAAS00063993}; Short=HMG aldolase {ECO:0000256|RuleBase:RU004338};; EC=4.1.1.3 {ECO:0000256|RuleBase:RU004338};; EC=4.1.3.17 {ECO:0000256|RuleBase:RU004338, ECO:0000256|SAAS:SAAS00063993};; Oxaloacetate decarboxylase {ECO:0000256|RuleBase:RU004338}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
Regulator of ribonuclease activity A n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6G3_9MICO
ribonuclease activity regulator protein RraA; K02553 regulator of ribonuclease activity A
SCNpilot_expt_500_bf_scaffold_3326_10
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7115..8200)
DNA (1086bp) protein (362aa)
ABC transporter permease protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XM07_9MICO rbh
ABC transporter permease protein {ECO:0000313|EMBL:GAD34145.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
sodium ABC transporter permease; K01992 ABC-2 type transport system permease protein
SCNpilot_expt_500_bf_scaffold_3326_11
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8197..9081)
DNA (885bp) protein (295aa)
ABC transporter related protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6G6_9MICO
ABC transporter related protein {ECO:0000313|EMBL:EIC07468.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
ABC transporter ATPase; K01990 ABC-2 type transport system ATP-binding protein
SCNpilot_expt_500_bf_scaffold_3326_12
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9228..9956)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AQV0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84542.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
SCNpilot_expt_500_bf_scaffold_3326_13
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9953..11254)
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A605_9MICO
Histidine kinase {ECO:0000313|EMBL:KIC57043.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
signal transduction histidine kinase
SCNpilot_expt_500_bf_scaffold_3326_14
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11484..12263
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A7H7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC07469.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3326_15
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12394..12693
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6G7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC07469.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3326_16
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12727..12930
DNA (204bp) protein (68aa)
NADPH-dependent FMN reductase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E770_9MICO
ACP phosphodiesterase {ECO:0000313|EMBL:KIC60139.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
NADPH-dependent FMN reductase
Displaying 16 items

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