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SCNpilot_expt_500_bf_scaffold_3486

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3486_1
unknown

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comp(1..153)
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3486_2
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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223..840
DNA (618bp) protein (206aa)
Transcriptional regulator PadR family protein n=2 Tax=Microbacterium RepID=H8E6T9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84446.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
putative PadR family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_3486_3
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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837..2345
DNA (1509bp) protein (503aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6U0_9MICO rbh
Multidrug resistance protein stp {ECO:0000313|EMBL:KJL33475.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
putative drug resistance transporter rbh
SCNpilot_expt_500_bf_scaffold_3486_4
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2542..3783)
DNA (1242bp) protein (414aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
purD; phosphoribosylamine-glycine ligase; K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13]
Phosphoribosylamine--glycine ligase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A5S1_9MICO
SCNpilot_expt_500_bf_scaffold_3486_5
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3982..4338
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036928D5
Uncharacterized protein {ECO:0000313|EMBL:EPD84449.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3486_6
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4410..4571)
DNA (162bp) protein (54aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6U3_9MICO
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:EIC07379.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
alcohol dehydrogenase GroES domain-containing protein
SCNpilot_expt_500_bf_scaffold_3486_7
unknown

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4821..5000
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3486_8
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5418..5744
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E8V1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC06580.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
trk-type K+ transport systems, membrane components
SCNpilot_expt_500_bf_scaffold_3486_9
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5799..6413)
DNA (615bp) protein (205aa)
Zn-dependent alcohol dehydrogenase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E8V2_9MICO
Zn-dependent alcohol dehydrogenase {ECO:0000313|EMBL:EIC06581.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
Zn-dependent alcohol dehydrogenase
SCNpilot_expt_500_bf_scaffold_3486_10
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6570..8426
DNA (1857bp) protein (619aa)
Putative uncharacterized protein n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21MN9_SACD2 rbh
acetyl-CoA carboxylase, biotin carboxylase; K09955 hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABD80040.1}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagus.;" source="Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024).;"
SCNpilot_expt_500_bf_scaffold_3486_11
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8490..8765
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034AD686
Uncharacterized protein {ECO:0000313|EMBL:KJL30484.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3486_12
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8896..9264
DNA (369bp) protein (123aa)
Histone acetyltransferase HPA2 n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NDD5_MICTS
Acetyltransferase (GNAT) family protein {ECO:0000313|EMBL:KJL30483.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
histone acetyltransferase HPA2
SCNpilot_expt_500_bf_scaffold_3486_13
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9283..9696)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E8R6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC06716.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
SCNpilot_expt_500_bf_scaffold_3486_14
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9799..10920
DNA (1122bp) protein (374aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
purM; phosphoribosylaminoimidazole (AIR) synthetase; K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E8W9_9MICO rbh
SCNpilot_expt_500_bf_scaffold_3486_15
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11927..12376
DNA (450bp) protein (150aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
purF; glutamine phosphoribosylpyrophosphate amidotransferase; K00764 amidophosphoribosyltransferase [EC:2.4.2.14]
Amidophosphoribosyltransferase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E8X0_9MICO
SCNpilot_expt_500_bf_scaffold_3486_16
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12416..13648
DNA (1233bp) protein (411aa)
Major facilitator superfamily MFS_1 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E8X1_9MICO rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EIC06600.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
cyanate permease; K03449 MFS transporter, CP family, cyanate transporter
SCNpilot_expt_500_bf_scaffold_3486_17
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13661..13849)
DNA (189bp) protein (63aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E8X2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC06601.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3486_18
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14030..14551
DNA (522bp) protein (174aa)
UspA domain-containing protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E8X3_9MICO
Universal stress protein UspA {ECO:0000313|EMBL:EXJ50600.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
universal stress protein UspA
SCNpilot_expt_500_bf_scaffold_3486_19
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14749..15372)
DNA (624bp) protein (208aa)
Transcriptional regulator PadR family protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E8X4_9MICO rbh
PadR family transcriptional regulator {ECO:0000313|EMBL:KIC58044.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
transcriptional regulator
SCNpilot_expt_500_bf_scaffold_3486_20
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15375..15647)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AUG8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC58045.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
Displaying 20 items

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