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SCNpilot_expt_500_bf_scaffold_3576

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3576_1
unknown

Not on your lists

comp(254..607)
DNA (354bp) protein (118aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3576_2
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(789..2018)
DNA (1230bp) protein (410aa)
Major facilitator superfamily MFS_1 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E465_9MICO
MFS transporter {ECO:0000313|EMBL:EXJ50719.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
permease of the major facilitator superfamily
SCNpilot_expt_500_bf_scaffold_3576_3
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2015..2446)
DNA (432bp) protein (144aa)
Regulatory protein MarR n=2 Tax=Microbacterium RepID=H8E466_9MICO
Transcriptional regulator {ECO:0000313|EMBL:KIC57673.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
transcriptional regulator
SCNpilot_expt_500_bf_scaffold_3576_4
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2602..3789
DNA (1188bp) protein (396aa)
Extracellular ligand-binding receptor n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E467_9MICO rbh
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIC57672.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein rbh
SCNpilot_expt_500_bf_scaffold_3576_5
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3794..4570
DNA (777bp) protein (259aa)
ABC transporter related protein n=2 Tax=Microbacterium RepID=H8E468_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD84300.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein
SCNpilot_expt_500_bf_scaffold_3576_6
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4567..5319
DNA (753bp) protein (251aa)
ABC transporter related protein n=2 Tax=Microbacterium RepID=H8E469_9MICO rbh
Branched-chain amino acid ABC transporter ATPase {ECO:0000313|EMBL:KIC57670.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
ABC-type branched-chain amino acid transport systems ATPase component; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_expt_500_bf_scaffold_3576_7
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5316..6191
DNA (876bp) protein (292aa)
ABC-type transporter, integral membrane subunit n=2 Tax=Microbacterium RepID=H8E470_9MICO rbh
ABC transporter permease {ECO:0000313|EMBL:KIC57669.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
SCNpilot_expt_500_bf_scaffold_3576_8
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6188..7327
DNA (1140bp) protein (380aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E471_9MICO rbh
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EIC08120.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
SCNpilot_expt_500_bf_scaffold_3576_9
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7327..8601
DNA (1275bp) protein (425aa)
AMP-dependent synthetase/ligase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
AMP-dependent synthetase and ligase n=2 Tax=Microbacterium RepID=H8E472_9MICO
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EIC08121.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
SCNpilot_expt_500_bf_scaffold_3576_10
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8805..9530
DNA (726bp) protein (242aa)
Regulatory protein TetR n=2 Tax=Microbacterium RepID=H8E473_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD84305.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
TetR family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_3576_11
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9523..10275
DNA (753bp) protein (251aa)
bdhA; 3-hydroxybutyrate dehydrogenase (EC:1.1.1.30); K00019 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] rbh
3-hydroxybutyrate dehydrogenase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036C4645 rbh
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:EXJ50724.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
SCNpilot_expt_500_bf_scaffold_3576_12
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10260..11171
DNA (912bp) protein (304aa)
Alpha/beta hydrolase fold containing protein n=2 Tax=Microbacterium RepID=H8E475_9MICO rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:KIC57782.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hydrolase or acyltransferase
SCNpilot_expt_500_bf_scaffold_3576_13
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11187..11384)
DNA (198bp) protein (66aa)
IclR family transcriptional regulator n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036FEF72
Uncharacterized protein {ECO:0000313|EMBL:EPD84308.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
transcriptional regulator
SCNpilot_expt_500_bf_scaffold_3576_14
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12011..12859
DNA (849bp) protein (283aa)
acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit; K01028 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
3-oxoacid CoA-transferase subunit A n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B6X5_9MICO
Succinyl-CoA:3-ketoacid-CoA transferase {ECO:0000313|EMBL:EXJ50727.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
SCNpilot_expt_500_bf_scaffold_3576_15
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12861..13514
DNA (654bp) protein (218aa)
acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit; K01029 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
3-oxoacid CoA-transferase, B subunit n=2 Tax=Microbacterium RepID=H8E478_9MICO
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B {ECO:0000313|EMBL:EPD84310.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
SCNpilot_expt_500_bf_scaffold_3576_16
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13511..14695
DNA (1185bp) protein (395aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KIC57664.1}; EC=2.3.1.9 {ECO:0000313|EMBL:KIC57664.1};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA C-acetyltransferase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A6V5_9MICO
SCNpilot_expt_500_bf_scaffold_3576_17
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15047..15301)
DNA (255bp) protein (85aa)
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit n=2 Tax=Microbacterium RepID=H8E484_9MICO
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit {ECO:0000313|EMBL:EIC08133.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit
SCNpilot_expt_500_bf_scaffold_3576_18
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15346..16755
DNA (1410bp) protein (470aa)
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) {ECO:0000256|RuleBase:RU362045}; EC=2.4.1.15 {ECO:0000256|RuleBase:RU362045};; Osmoregulatory trehalose synthesis protein A {ECO:0000256|RuleBase:RU362045}; Trehalose-6-phosphate synthase {ECO:0000256|RuleBase:RU362045}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
trehalose-6-phosphate synthase; K00697 trehalose 6-phosphate synthase [EC:2.4.1.15]
Glycosyl transferase family 20 n=2 Tax=Microbacterium RepID=H8E485_9MICO rbh
SCNpilot_expt_500_bf_scaffold_3576_19
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16752..17525
DNA (774bp) protein (258aa)
Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}; EC=3.1.3.12 {ECO:0000256|RuleBase:RU361117};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
trehalose-6-phosphatase; K01087 trehalose 6-phosphate phosphatase [EC:3.1.3.12]
Trehalose-phosphatase n=2 Tax=Microbacterium RepID=H8E486_9MICO rbh
SCNpilot_expt_500_bf_scaffold_3576_20
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17535..18668
DNA (1134bp) protein (378aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
ilvD; dihydroxyacid dehydratase/phosphogluconate dehydratase; K01687 dihydroxy-acid dehydratase [EC:4.2.1.9]
dihydroxy-acid dehydratase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003481907
SCNpilot_expt_500_bf_scaffold_3576_21
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18755..21040
DNA (2286bp) protein (762aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
ilvB; thiamine pyrophosphate-requiring enzyme; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] rbh
acetolactate synthase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034B9245 rbh
SCNpilot_expt_500_bf_scaffold_3576_22
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21043..21384
DNA (342bp) protein (114aa)
ilvH; acetolactate synthase, small (regulatory) subunit; K01653 acetolactate synthase I/III small subunit [EC:2.2.1.6]
Acetolactate synthase, small subunit n=2 Tax=Microbacterium RepID=H8E489_9MICO
Acetolactate synthase small subunit {ECO:0000313|EMBL:EPD84321.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
Displaying 22 items

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