ggKbase home page

SCNpilot_expt_500_bf_scaffold_3578

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3578_1
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..837)
DNA (837bp) protein (279aa)
Phosphate ABC transporter, permease PstA n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A7F2_9MICO
Phosphate ABC transporter permease {ECO:0000313|EMBL:KIC60032.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
pstA; phosphate ABC transporter permease; K02038 phosphate transport system permease protein
SCNpilot_expt_500_bf_scaffold_3578_2
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(834..1835)
DNA (1002bp) protein (334aa)
Phosphate ABC transporter, inner membrane subunit PstC n=2 Tax=Microbacterium RepID=H8E609_9MICO
Phosphate ABC transporter permease {ECO:0000313|EMBL:EXJ52330.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
pstC; phosphate ABC transporter permease; K02037 phosphate transport system permease protein
SCNpilot_expt_500_bf_scaffold_3578_3
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1966..3093)
DNA (1128bp) protein (376aa)
Phosphate-binding protein PstS n=2 Tax=Microbacterium RepID=H8E608_9MICO rbh
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
phosphate ABC transporter periplasmic protein; K02040 phosphate transport system substrate-binding protein
SCNpilot_expt_500_bf_scaffold_3578_4
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3279..3575
DNA (297bp) protein (99aa)
Mucin-associated surface protein (MASP) n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E607_9MICO
Mucin-associated surface protein (MASP) {ECO:0000313|EMBL:EIC07604.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
SCNpilot_expt_500_bf_scaffold_3578_5
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3577..7266
DNA (3690bp) protein (1230aa)
Amino acid adenylation domain-containing protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ASG3_9MICO
Amino acid adenylation domain-containing protein {ECO:0000313|EMBL:EPD85077.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
non-ribosomal peptide synthetase modules
SCNpilot_expt_500_bf_scaffold_3578_6
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7778..8710
DNA (933bp) protein (311aa)
Peptidase M1 membrane alanine aminopeptidase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E605_9MICO
Peptidase M1 {ECO:0000313|EMBL:KIC60036.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
aminopeptidase N
SCNpilot_expt_500_bf_scaffold_3578_7
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8628..9212)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B8Y5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85079.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
SCNpilot_expt_500_bf_scaffold_3578_8
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9212..10153)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AEH3_9MICO
DNA mismatch repair protein MutT {ECO:0000313|EMBL:KIC60039.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
NTP pyrophosphohydrolase including oxidative damage repair enzyme rbh
SCNpilot_expt_500_bf_scaffold_3578_9
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10150..12324)
DNA (2175bp) protein (725aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
ppk; polyphosphate kinase; K00937 polyphosphate kinase [EC:2.7.4.1]
Polyphosphate kinase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E602_9MICO rbh
SCNpilot_expt_500_bf_scaffold_3578_10
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12368..13066)
DNA (699bp) protein (233aa)
transcriptional regulator n=1 Tax=Microbacterium yannicii RepID=UPI00037C5DE4 rbh
Transcriptional regulator domain-containing protein {ECO:0000313|EMBL:EIC07598.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
glnR; response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
SCNpilot_expt_500_bf_scaffold_3578_11
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13096..13470
DNA (375bp) protein (125aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E600_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC07597.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3578_12
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13501..13614
DNA (114bp) protein (38aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E5Z9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC07596.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
SCNpilot_expt_500_bf_scaffold_3578_13
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13620..14231
DNA (612bp) protein (204aa)
UPF0678 fatty acid-binding protein-like protein HMPREF1529_01698 n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AEH9_9MICO rbh
UPF0678 fatty acid-binding protein-like protein HMPREF1529_01698 {ECO:0000256|HAMAP-Rule:MF_01297}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3578_14
unknown

Not on your lists

comp(14135..14824)
DNA (690bp) protein (230aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3578_15
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14944..15258
DNA (315bp) protein (105aa)
Folate-binding protein YgfZ n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A9C0_9MICO
Folate-binding protein YgfZ {ECO:0000313|EMBL:EPD85086.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
aminomethyltransferase; K06980
SCNpilot_expt_500_bf_scaffold_3578_16
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15275..16384
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5Z6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC60305.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3578_17
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16394..16789)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Microbacterium RepID=UPI000363FB18
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ75690.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
Displaying 17 items

View Taxonomy