ggKbase home page

SCNpilot_expt_500_bf_scaffold_3700

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3700_1
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..321
DNA (321bp) protein (107aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
beta-glucosidase-related glycosidase; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52]
Glycoside hydrolase family 3 domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E8Z3_9MICO
SCNpilot_expt_500_bf_scaffold_3700_2
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

473..763
DNA (291bp) protein (97aa)
Putative transposase n=1 Tax=Gordonia malaquae NBRC 108250 RepID=M3UP92_9ACTO
Contig_26, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89906.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
transposase
SCNpilot_expt_500_bf_scaffold_3700_3
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

878..1297
DNA (420bp) protein (140aa)
Putative transposase n=1 Tax=Gordonia malaquae NBRC 108250 RepID=M3TKW5_9ACTO
Contig_26, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89905.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
transposase and inactivated derivatives
SCNpilot_expt_500_bf_scaffold_3700_4
Mesorhizobium sp. UASWS1009, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1258..1836)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI00037611DB
Contig87, whole genome shotgun sequence {ECO:0000313|EMBL:KIU58041.1}; TaxID=1566387 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. UASWS1009.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3700_5
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2018..4681
DNA (2664bp) protein (888aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E8Z4_9MICO rbh
DEAD/DEAH box helicase {ECO:0000313|EMBL:EXJ51092.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
superfamily II RNA helicase
SCNpilot_expt_500_bf_scaffold_3700_6
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4737..6788
DNA (2052bp) protein (684aa)
recQ; superfamily II DNA helicase; K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12]
ATP-dependent DNA helicase RecQ n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E8Z5_9MICO
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EIC06624.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
SCNpilot_expt_500_bf_scaffold_3700_7
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7009..9114
DNA (2106bp) protein (702aa)
acyl-CoA dehydrogenase; K00232 acyl-CoA oxidase [EC:1.3.3.6]
Acyl-CoA oxidase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BAX4_9MICO rbh
Acyl-CoA oxidase {ECO:0000313|EMBL:EPD85724.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
SCNpilot_expt_500_bf_scaffold_3700_8
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9261..10304
DNA (1044bp) protein (348aa)
TIGR01777 family protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A974_9MICO rbh
TIGR01777 family protein {ECO:0000313|EMBL:EPD85723.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
nucleoside-diphosphate sugar epimerase; K07071
SCNpilot_expt_500_bf_scaffold_3700_9
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10301..10879
DNA (579bp) protein (193aa)
3-methyladenine DNA glycosylase {ECO:0000313|EMBL:KIC59520.1}; EC=3.2.2.20 {ECO:0000313|EMBL:KIC59520.1};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
tag; 3-methyladenine DNA glycosylase (EC:3.2.2.20)
DNA-3-methyladenine glycosylase n=1 Tax=Microbacterium sp. 11MF RepID=UPI00037A930E rbh
SCNpilot_expt_500_bf_scaffold_3700_10
Mycobacterium lentiflavum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10821..11813)
DNA (993bp) protein (331aa)
quinone oxidoreductase n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B3B59B rbh
Quinone oxidoreductase {ECO:0000313|EMBL:CQD22444.1}; TaxID=141349 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium lentiflavum.;"
zinc-containing alcohol dehydrogenase rbh
SCNpilot_expt_500_bf_scaffold_3700_11
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11878..12513
DNA (636bp) protein (212aa)
TetR family transcriptional regulator n=1 Tax=Streptomyces griseoaurantiacus M045 RepID=F3NL31_9ACTO
TetR family transcriptional regulator {ECO:0000313|EMBL:KIH98498.1}; TaxID=183763 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
SC10B8A.04; TetR family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_3700_12
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12597..14957
DNA (2361bp) protein (787aa)
ABC transporter n=1 Tax=Microbacterium sp. 292MF RepID=UPI000360CBEC rbh
ABC transporter {ECO:0000313|EMBL:EXJ53207.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
excinuclease ATPase subunit
SCNpilot_expt_500_bf_scaffold_3700_13
unknown

Not on your lists

comp(15207..15761)
DNA (555bp) protein (185aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3700_14
unknown

Not on your lists

comp(15798..16202)
DNA (405bp) protein (135aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3700_15
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17332..18171
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ABF7_9MICO
Fibronectin {ECO:0000313|EMBL:KIC59519.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
fibronectin type III domain-containing protein
SCNpilot_expt_500_bf_scaffold_3700_16
unknown

Not on your lists

comp(18358..18480)
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3700_17
unknown

Not on your lists

comp(18625..18951)
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3700_18
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19393..20994
DNA (1602bp) protein (534aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ABF7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ53208.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
fibronectin type III domain-containing protein
SCNpilot_expt_500_bf_scaffold_3700_19
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21038..22009
DNA (972bp) protein (324aa)
MoxR-like ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-]
ATPase associated with various cellular activities AAA_3 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E902_9MICO
ATPase {ECO:0000313|EMBL:KIC59518.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
SCNpilot_expt_500_bf_scaffold_3700_20
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22009..23325
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BAW9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ53210.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_3700_21
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23322..24026
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A967_9MICO
Transglutaminase {ECO:0000313|EMBL:KIC59516.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
transglutaminase domain-containing protein
Displaying 21 items

View Taxonomy